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  5. Cpa|evm.model.tig00020553.111

Cpa|evm.model.tig00020553.111 (tig00020553_g10597.t1)


Aliases : tig00020553_g10597.t1

No description available


Gene families : OG_01_0000030 (OrthoFinder) Phylogenetic Tree(s): OG0000030_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020553.111
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
PTI_07G01880.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
PTI_10G00610.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
PTI_24G00530.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Sro1473_g275610.1 Contig4548.g33992 Helicase 0.01 OrthoFinder
Sro266_g103260.1 Contig1823.g16057 Helicase 0.02 OrthoFinder
Sro32_g020660.1 Contig3715.g28539 Helicase 0.01 OrthoFinder
Sro369_g128180.1 Contig1690.g15141 Helicase 0.01 OrthoFinder
Sro612_g175490.1 Contig276.g3567 Helicase 0.02 OrthoFinder
Sro8_g006900.1 Contig89.g1003 Helicase 0.02 OrthoFinder
SymbC1.scaffold7381.2 7381.2 Hypothetical protein 0.01 OrthoFinder
TP01G04770.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
TP16G00390.1 No alias Helicase-associated [Interproscan]. 0.02 OrthoFinder
Transcript_contig_54935 54935 Helicase-associated [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004540 ribonuclease activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0009314 response to radiation IEP Enrichment
BP GO:0009416 response to light stimulus IEP Enrichment
BP GO:0009581 detection of external stimulus IEP Enrichment
BP GO:0009582 detection of abiotic stimulus IEP Enrichment
BP GO:0009583 detection of light stimulus IEP Enrichment
BP GO:0009584 detection of visible light IEP Enrichment
BP GO:0009605 response to external stimulus IEP Enrichment
BP GO:0009628 response to abiotic stimulus IEP Enrichment
BP GO:0016071 mRNA metabolic process IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0018298 protein-chromophore linkage IEP Enrichment
BP GO:0051606 detection of stimulus IEP Enrichment
InterPro domains Description Start Stop
IPR005114 Helicase_assoc 179 240
IPR005114 Helicase_assoc 376 434
IPR005114 Helicase_assoc 246 280
IPR018962 DUF1995 465 690
No external refs found!