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  5. SymbC1.scaffold20.171

SymbC1.scaffold20.171 (20.171)


Aliases : 20.171

Description : GNAT domain; Acyl-CoA dehydrogenase/oxidase C-terminal; Acyl-CoA oxidase/dehydrogenase, central domain; MaoC-like dehydratase domain; Acyl-CoA dehydrogenase/oxidase, N-terminal; Domain of unknown function DUF547 [Interproscan].


Gene families : OG_01_0007301 (OrthoFinder) Phylogenetic Tree(s): OG0007301_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold20.171
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4.420 4.420 Oxoglutarate/iron-dependent dioxygenase; Domain of... 0.04 OrthoFinder
SymbC1.scaffold4.523 4.523 Luciferase-like domain; Acyl-CoA dehydrogenase/oxidase,... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0008080 N-acetyltransferase activity IEA Interproscan
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003729 mRNA binding IEP Enrichment
MF GO:0003954 NADH dehydrogenase activity IEP Enrichment
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP Enrichment
MF GO:0005436 sodium:phosphate symporter activity IEP Enrichment
CC GO:0005694 chromosome IEP Enrichment
BP GO:0005984 disaccharide metabolic process IEP Enrichment
BP GO:0005985 sucrose metabolic process IEP Enrichment
BP GO:0006536 glutamate metabolic process IEP Enrichment
BP GO:0006537 glutamate biosynthetic process IEP Enrichment
BP GO:0006817 phosphate ion transport IEP Enrichment
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0015081 sodium ion transmembrane transporter activity IEP Enrichment
MF GO:0015291 secondary active transmembrane transporter activity IEP Enrichment
MF GO:0015294 solute:cation symporter activity IEP Enrichment
MF GO:0015370 solute:sodium symporter activity IEP Enrichment
MF GO:0015930 glutamate synthase activity IEP Enrichment
MF GO:0016157 sucrose synthase activity IEP Enrichment
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Enrichment
MF GO:0030674 protein-macromolecule adaptor activity IEP Enrichment
MF GO:0032182 ubiquitin-like protein binding IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
MF GO:0035596 methylthiotransferase activity IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0043130 ubiquitin binding IEP Enrichment
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Enrichment
BP GO:0044341 sodium-dependent phosphate transport IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
MF GO:0050043 lactate racemase activity IEP Enrichment
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Enrichment
MF GO:0050497 alkylthioltransferase activity IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
MF GO:0060090 molecular adaptor activity IEP Enrichment
InterPro domains Description Start Stop
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 138 216
IPR000182 GNAT_dom 395 498
IPR002539 MaoC-like_dom 505 598
IPR013786 AcylCoA_DH/ox_N 6 120
IPR009075 AcylCo_DH/oxidase_C 229 369
IPR006869 DUF547 785 888
No external refs found!