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  5. SymbC1.scaffold2.846

SymbC1.scaffold2.846 (2.846)


Aliases : 2.846

Description : Domain of unknown function DUF58; ATPase, AAA-3; Putative glutamine amidotransferase; Aerotolerance regulator, N-terminal; ChlI/MoxR, AAA lid domain [Interproscan].


Gene families : OG_01_0000231 (OrthoFinder) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2.846
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1082 1.1082 von Willebrand factor, type A; Putative glutamine... 0.03 OrthoFinder
SymbC1.scaffold1.1641 1.1641 von Willebrand factor, type A; Beta-galactosidase... 0.04 OrthoFinder
SymbC1.scaffold1.75 1.75 ATPase, AAA-3; Domain of unknown function DUF58;... 0.02 OrthoFinder
SymbC1.scaffold1.888 1.888 Pyrrolo-quinoline quinone repeat; RNA polymerase... 0.03 OrthoFinder
SymbC1.scaffold16.193 16.193 von Willebrand factor, type A; Aerotolerance regulator,... 0.06 OrthoFinder
SymbC1.scaffold2.1303 2.1303 Aerotolerance regulator, N-terminal; von Willebrand... 0.03 OrthoFinder
SymbC1.scaffold2.1387 2.1387 von Willebrand factor, type A; ATPase, AAA-3; Domain of... 0.04 OrthoFinder
SymbC1.scaffold2.1498 2.1498 Domain of unknown function DUF58; ATPase, AAA-3;... 0.03 OrthoFinder
SymbC1.scaffold20794.1 20794.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold22.285 22.285 Transposase IS3/IS911family; Integrase, catalytic core;... 0.03 OrthoFinder
SymbC1.scaffold23723.1 23723.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold32647.1 32647.1 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold37362.1 37362.1 ATPase, AAA-3 [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold4.72 4.72 Protein of unknown function (DUF4381; von Willebrand... 0.02 OrthoFinder
SymbC1.scaffold5.923 5.923 Domain of unknown function DUF58; Pyrrolo-quinoline... 0.03 OrthoFinder
SymbC1.scaffold8196.1 8196.1 Hypothetical protein 0.02 OrthoFinder
SymbC1.scaffold9.400 9.400 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold9.402 9.402 Domain of unknown function DUF58 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold9.403 9.403 PFTB repeat; Glycosyl hydrolase family 98, putative... 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
MF GO:0016887 ATPase IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003747 translation release factor activity IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004536 deoxyribonuclease activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
BP GO:0006415 translational termination IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006568 tryptophan metabolic process IEP Enrichment
BP GO:0006586 indolalkylamine metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006721 terpenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006873 cellular ion homeostasis IEP Enrichment
BP GO:0006875 cellular metal ion homeostasis IEP Enrichment
MF GO:0008079 translation termination factor activity IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
BP GO:0008360 regulation of cell shape IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
CC GO:0009318 exodeoxyribonuclease VII complex IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0016114 terpenoid biosynthetic process IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
MF GO:0019238 cyclohydrolase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0022411 cellular component disassembly IEP Enrichment
BP GO:0022603 regulation of anatomical structure morphogenesis IEP Enrichment
BP GO:0022604 regulation of cell morphogenesis IEP Enrichment
BP GO:0030003 cellular cation homeostasis IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0032984 protein-containing complex disassembly IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042430 indole-containing compound metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0043624 cellular protein complex disassembly IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Enrichment
BP GO:0046916 cellular transition metal ion homeostasis IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
BP GO:0048878 chemical homeostasis IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
BP GO:0050789 regulation of biological process IEP Enrichment
BP GO:0050793 regulation of developmental process IEP Enrichment
BP GO:0050801 ion homeostasis IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0055065 metal ion homeostasis IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055076 transition metal ion homeostasis IEP Enrichment
BP GO:0055080 cation homeostasis IEP Enrichment
BP GO:0055082 cellular chemical homeostasis IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0098771 inorganic ion homeostasis IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002881 DUF58 366 451
IPR024163 Aerotolerance_reg_N 617 682
IPR041628 ChlI/MoxR_AAA_lid 238 303
IPR010768 GATase1-like 1691 1856
IPR011703 ATPase_AAA-3 28 161
No external refs found!