SymbC1.scaffold2.668 (2.668)

Aliases : 2.668

Description : Regulator of nucleoside diphosphate kinase, N-terminal domain; HpcH/HpaI aldolase/citrate lyase domain; Transcription elongation factor, GreA/GreB, C-terminal [Interproscan].

Gene families : OG_01_0006198 (OrthoFinder) Phylogenetic Tree(s): OG0006198_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2.668
Cluster	HCCA: Cluster_120

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0003824	catalytic activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032784	regulation of DNA-templated transcription, elongation	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003712	transcription coregulator activity	IEP	Enrichment
MF	GO:0003714	transcription corepressor activity	IEP	Enrichment
MF	GO:0015562	efflux transmembrane transporter activity	IEP	Enrichment
MF	GO:0016989	sigma factor antagonist activity	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR029462	Rnk_N	7	48
IPR005000	Aldolase/citrate-lyase_domain	211	410
IPR001437	Tscrpt_elong_fac_GreA/B_C	54	126

External Links

No external refs found!

SymbC1.scaffold2.668 (2.668)

Expression Profile

Co-expression Networks

Functional Annotation