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  5. SymbC1.scaffold2.2122

SymbC1.scaffold2.2122 (2.2122)


Aliases : 2.2122

Description : Pyrrolo-quinoline quinone repeat [Interproscan].


Gene families : OG_01_0000231 (OrthoFinder) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2.2122
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.38 1.38 von Willebrand factor, type A; Aerotolerance regulator,... 0.05 OrthoFinder
SymbC1.scaffold1.75 1.75 ATPase, AAA-3; Domain of unknown function DUF58;... 0.03 OrthoFinder
SymbC1.scaffold16.194 16.194 ATPase, AAA-3; Domain of unknown function DUF58;... 0.02 OrthoFinder
SymbC1.scaffold2.1498 2.1498 Domain of unknown function DUF58; ATPase, AAA-3;... 0.03 OrthoFinder
SymbC1.scaffold2.2121 2.2121 PDZ domain; Glycosyl hydrolase family 98, putative... 0.04 OrthoFinder
SymbC1.scaffold32647.1 32647.1 ATPase, AAA-3; ChlI/MoxR, AAA lid domain [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold5.923 5.923 Domain of unknown function DUF58; Pyrrolo-quinoline... 0.03 OrthoFinder
SymbC1.scaffold9.402 9.402 Domain of unknown function DUF58 [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Enrichment
CC GO:0098797 plasma membrane protein complex IEP Enrichment
CC GO:1902495 transmembrane transporter complex IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
CC GO:1904949 ATPase complex IEP Enrichment
CC GO:1990351 transporter complex IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR002372 PQQ_repeat 430 589
IPR002372 PQQ_repeat 601 738
IPR002372 PQQ_repeat 1188 1346
No external refs found!