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Aliases : 2.2000
Description : Condensation domain; MacB-like periplasmic core domain; AMP-binding enzyme, C-terminal domain; Pyridine nucleotide-disulphide oxidoreductase; AMP-dependent synthetase/ligase; ABC transporter permease protein domain; Phosphopantetheine binding ACP domain [Interproscan].
Gene families : OG_01_0000621 (OrthoFinder) Phylogenetic Tree(s): OG0000621_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold2.2000 | |
| Cluster | HCCA: Cluster_55 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Sro184_g079840.1 | Contig2216.g18387 | Putative fatty-acid--CoA ligase FadD21 | 0.01 | OrthoFinder | |
| Sro2001_g310290.1 | Contig2691.g21730 | Putative fatty-acid--CoA ligase FadD21 | 0.01 | OrthoFinder | |
| Sro550_g164710.1 | Contig731.g8401 | Putative fatty-acid--CoA ligase FadD21 | 0.01 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEA | Interproscan |
| CC | GO:0016020 | membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004057 | arginyltransferase activity | IEP | Enrichment |
| MF | GO:0004066 | asparagine synthase (glutamine-hydrolyzing) activity | IEP | Enrichment |
| BP | GO:0006528 | asparagine metabolic process | IEP | Enrichment |
| BP | GO:0006529 | asparagine biosynthetic process | IEP | Enrichment |
| MF | GO:0008483 | transaminase activity | IEP | Enrichment |
| BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | Enrichment |
| BP | GO:0009067 | aspartate family amino acid biosynthetic process | IEP | Enrichment |
| BP | GO:0016598 | protein arginylation | IEP | Enrichment |
| MF | GO:0016755 | aminoacyltransferase activity | IEP | Enrichment |
| MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Enrichment |
| MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Enrichment |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000873 | AMP-dep_Synth/Lig | 2104 | 2509 |
| IPR000873 | AMP-dep_Synth/Lig | 378 | 824 |
| IPR009081 | PP-bd_ACP | 2622 | 2681 |
| IPR009081 | PP-bd_ACP | 964 | 1026 |
| IPR025110 | AMP-bd_C | 2517 | 2592 |
| IPR025857 | MacB_PCD | 2 | 196 |
| IPR003838 | ABC3_permease_dom | 254 | 341 |
| IPR001242 | Condensatn | 1639 | 2083 |
| IPR001242 | Condensatn | 2698 | 3148 |
| No external refs found! |