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  5. SymbC1.scaffold2.1870

SymbC1.scaffold2.1870 (2.1870)


Aliases : 2.1870

Description : Domain of unknown function DUF1080; Oxidoreductase, N-terminal [Interproscan].


Gene families : OG_01_0006545 (OrthoFinder) Phylogenetic Tree(s): OG0006545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2.1870
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1581 1.1581 Oxidoreductase, N-terminal; Sodium/solute symporter... 0.04 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
MF GO:0008270 zinc ion binding IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Enrichment
BP GO:0032200 telomere organization IEP Enrichment
BP GO:0042254 ribosome biogenesis IEP Enrichment
BP GO:0044085 cellular component biogenesis IEP Enrichment
BP GO:0060249 anatomical structure homeostasis IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR000683 Gfo/Idh/MocA-like_OxRdtase_N 437 555
IPR010496 3-keto-disaccharide_hydrolase 22 187
IPR010496 3-keto-disaccharide_hydrolase 206 389
No external refs found!