SymbC1.scaffold2.1567 (2.1567)


Aliases : 2.1567

Description : Type VI secretion system sheath protein TssB1; Type VI secretion system TssC-like [Interproscan].


Gene families : OG_01_0005023 (OrthoFinder) Phylogenetic Tree(s): OG0005023_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2.1567
Cluster HCCA: Cluster_100


Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Enrichment
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0003986 acetyl-CoA hydrolase activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004560 alpha-L-fucosidase activity IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006083 acetate metabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008410 CoA-transferase activity IEP Enrichment
MF GO:0008775 acetate CoA-transferase activity IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
MF GO:0015928 fucosidase activity IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0016853 isomerase activity IEP Enrichment
MF GO:0016854 racemase and epimerase activity IEP Enrichment
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019541 propionate metabolic process IEP Enrichment
BP GO:0019679 propionate metabolic process, methylcitrate cycle IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
BP GO:0032259 methylation IEP Enrichment
BP GO:0046459 short-chain fatty acid metabolic process IEP Enrichment
MF GO:0050043 lactate racemase activity IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR008312 T6SS_TssB1 1663 1815
IPR010269 T6SS_TssC-like 1875 2304
No external refs found!