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  5. SymbC1.scaffold2.1430

SymbC1.scaffold2.1430 (2.1430)


Aliases : 2.1430

Description : Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Pyrrolo-quinoline quinone repeat; Aldehyde dehydrogenase domain; Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA [Interproscan].


Gene families : OG_01_0000559 (OrthoFinder) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2.1430
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
EOD14746 No alias Succinate-semialdehyde dehydrogenase [NAD(P)] [Ensembl]. 0.02 OrthoFinder
SymbC1.scaffold109.90 109.90 TRAP transporter solute receptor DctP/TeaA; TRAP... 0.05 OrthoFinder
SymbC1.scaffold19379.1 19379.1 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016209 antioxidant activity IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Enrichment
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Enrichment
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0004497 monooxygenase activity IEP Enrichment
MF GO:0005507 copper ion binding IEP Enrichment
BP GO:0006083 acetate metabolic process IEP Enrichment
BP GO:0006091 generation of precursor metabolites and energy IEP Enrichment
BP GO:0006113 fermentation IEP Enrichment
BP GO:0006351 transcription, DNA-templated IEP Enrichment
BP GO:0006553 lysine metabolic process IEP Enrichment
BP GO:0006554 lysine catabolic process IEP Enrichment
BP GO:0006631 fatty acid metabolic process IEP Enrichment
MF GO:0008144 drug binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008658 penicillin binding IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0009063 cellular amino acid catabolic process IEP Enrichment
BP GO:0009066 aspartate family amino acid metabolic process IEP Enrichment
BP GO:0009068 aspartate family amino acid catabolic process IEP Enrichment
BP GO:0009308 amine metabolic process IEP Enrichment
BP GO:0009890 negative regulation of biosynthetic process IEP Enrichment
BP GO:0009892 negative regulation of metabolic process IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Enrichment
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
BP GO:0015833 peptide transport IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0016054 organic acid catabolic process IEP Enrichment
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0016714 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen IEP Enrichment
BP GO:0019475 L-lysine catabolic process to acetate IEP Enrichment
BP GO:0019477 L-lysine catabolic process IEP Enrichment
BP GO:0019665 anaerobic amino acid catabolic process IEP Enrichment
BP GO:0019666 nitrogenous compound fermentation IEP Enrichment
BP GO:0019748 secondary metabolic process IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
MF GO:0030058 amine dehydrogenase activity IEP Enrichment
BP GO:0031324 negative regulation of cellular metabolic process IEP Enrichment
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Enrichment
MF GO:0031406 carboxylic acid binding IEP Enrichment
MF GO:0033218 amide binding IEP Enrichment
MF GO:0033293 monocarboxylic acid binding IEP Enrichment
MF GO:0034062 5'-3' RNA polymerase activity IEP Enrichment
CC GO:0042597 periplasmic space IEP Enrichment
BP GO:0042886 amide transport IEP Enrichment
MF GO:0043177 organic acid binding IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
BP GO:0045892 negative regulation of transcription, DNA-templated IEP Enrichment
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0046395 carboxylic acid catabolic process IEP Enrichment
BP GO:0046440 L-lysine metabolic process IEP Enrichment
MF GO:0046983 protein dimerization activity IEP Enrichment
BP GO:0048519 negative regulation of biological process IEP Enrichment
BP GO:0048523 negative regulation of cellular process IEP Enrichment
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Enrichment
BP GO:0051253 negative regulation of RNA metabolic process IEP Enrichment
BP GO:0051301 cell division IEP Enrichment
BP GO:0097659 nucleic acid-templated transcription IEP Enrichment
MF GO:0097747 RNA polymerase activity IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901565 organonitrogen compound catabolic process IEP Enrichment
BP GO:1901606 alpha-amino acid catabolic process IEP Enrichment
BP GO:1902679 negative regulation of RNA biosynthetic process IEP Enrichment
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP Enrichment
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR000866 AhpC/TSA 1773 1892
IPR015590 Aldehyde_DH_dom 379 787
IPR002372 PQQ_repeat 1375 1546
IPR002372 PQQ_repeat 1574 1668
IPR001670 ADH_Fe/GldA 834 1193
No external refs found!