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  5. SymbC1.scaffold2.1259

SymbC1.scaffold2.1259 (2.1259)


Aliases : 2.1259

Description : HEAT repeats; SGNH hydrolase-type esterase domain; DNA integrity scanning protein, DisA, N-terminal [Interproscan].


Gene families : OG_01_0000828 (OrthoFinder) Phylogenetic Tree(s): OG0000828_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold2.1259
Cluster HCCA: Cluster_99

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.2001 1.2001 HEAT repeats; SGNH hydrolase-type esterase domain;... 0.02 OrthoFinder
SymbC1.scaffold1.2089 1.2089 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
SymbC1.scaffold12625.2 12625.2 Cytochrome c-like domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold20814.1 20814.1 Sulfatase, N-terminal; Diphthamide synthase domain... 0.04 OrthoFinder
SymbC1.scaffold23599.1 23599.1 HEAT repeats [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold25134.1 25134.1 HEAT repeats [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
BP GO:0015074 DNA integration IEP Enrichment
MF GO:0015252 proton channel activity IEP Enrichment
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP Enrichment
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
BP GO:0071586 CAAX-box protein processing IEP Enrichment
InterPro domains Description Start Stop
IPR013830 SGNH_hydro 535 706
IPR003390 DNA_integrity_scan_DisA_N 2189 2314
No external refs found!