SymbC1.scaffold2.1028 (2.1028)

Aliases : 2.1028

Description : RHS repeat; Na-Ca exchanger/integrin-beta4 [Interproscan].

Gene families : OG_01_0005046 (OrthoFinder) Phylogenetic Tree(s): OG0005046_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold2.1028
Cluster	HCCA: Cluster_106

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0007154	cell communication	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	Interproscan
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Enrichment
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Enrichment
BP	GO:0006790	sulfur compound metabolic process	IEP	Enrichment
BP	GO:0008104	protein localization	IEP	Enrichment
BP	GO:0015031	protein transport	IEP	Enrichment
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	Enrichment
BP	GO:0017038	protein import	IEP	Enrichment
BP	GO:0033036	macromolecule localization	IEP	Enrichment
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Enrichment
BP	GO:0045184	establishment of protein localization	IEP	Enrichment
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR003644	Calx_beta	370	469
IPR003644	Calx_beta	560	601
IPR003644	Calx_beta	254	344
IPR031325	RHS_repeat	1719	1751
IPR031325	RHS_repeat	1379	1407
IPR031325	RHS_repeat	1422	1449
IPR031325	RHS_repeat	1572	1605
IPR031325	RHS_repeat	1328	1357

External Links

No external refs found!