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  5. SymbC1.scaffold1958.1

SymbC1.scaffold1958.1 (1958.1)


Aliases : 1958.1

Description : Thrombospondin type-1 (TSP1) repeat [Interproscan].


Gene families : OG_01_0002877 (OrthoFinder) Phylogenetic Tree(s): OG0002877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1958.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold3618.1 3618.1 Thrombospondin type-1 (TSP1) repeat [Interproscan]. 0.04 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:2001070 starch binding IEP Enrichment
InterPro domains Description Start Stop
IPR000884 TSP1_rpt 110 158
IPR000884 TSP1_rpt 349 371
IPR000884 TSP1_rpt 53 102
IPR000884 TSP1_rpt 273 308
No external refs found!