SymbC1.scaffold1954.5 (1954.5)

Aliases : 1954.5

Description : Ribosomal protein L22e [Interproscan].

Gene families : OG_01_0002253 (OrthoFinder) Phylogenetic Tree(s): OG0002253_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1954.5
Cluster	HCCA: Cluster_21

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001206.7	tig00001206_g7490.t1	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder
Cre07.g357850	30774301, RPL22	Protein biosynthesis.cytosolic ribosome.large subunit...	0.01	OrthoFinder
Cz08g30250.t1	No alias	Ribosomal protein L22e [Interproscan].	0.01	OrthoFinder
Dusal.0067s00003.1	33194677	Ribosomal protein L22e [Interproscan].	0.02	OrthoFinder
OT_12G02920.1	No alias	Ribosomal protein L22e [Interproscan].	0.01	OrthoFinder
PTI_20G02050.1	No alias	Ribosomal protein L22e [Interproscan].	0.01	OrthoFinder
Sro89_g046870.1	Contig3846.g29608	60S ribosomal protein L22	0.01	OrthoFinder
Vocar.0051s0045.1	32886996	Ribosomal protein L22e [Interproscan].	0.02	OrthoFinder
XM_002499837.1	MICPUN_90144, 90144	Ribosomal protein L22e [Interproscan].	0.02	OrthoFinder
XM_003055223.1	MicpuC2_31192, 31192	Ribosomal protein L22e [Interproscan].	0.01	OrthoFinder
lcl\|LHPG02000014.1_cds_PRW39267.1_2590	PRW39267	60S ribosomal L22-2	0.01	OrthoFinder
lcl\|VRMN01000001.1_cds_KAA8499191.1_8144	KAA8499191	60S ribosomal protein L22	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002671	Ribosomal_L22e	18	125

External Links

No external refs found!

SymbC1.scaffold1954.5 (1954.5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation