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  5. SymbC1.scaffold1954.4

SymbC1.scaffold1954.4 (1954.4)


Aliases : 1954.4

Description : Carbohydrate binding module family 20; Glycosyl transferase, family 1; Starch synthase, catalytic domain [Interproscan].


Gene families : OG_01_0000262 (OrthoFinder) Phylogenetic Tree(s): OG0000262_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1954.4
Cluster HCCA: Cluster_98

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold511.1 511.1 Glycosyl transferase, family 1; Starch synthase,... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004198 calcium-dependent cysteine-type endopeptidase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
BP GO:0006006 glucose metabolic process IEP Enrichment
BP GO:0006094 gluconeogenesis IEP Enrichment
BP GO:0019318 hexose metabolic process IEP Enrichment
BP GO:0019319 hexose biosynthetic process IEP Enrichment
BP GO:0045454 cell redox homeostasis IEP Enrichment
BP GO:0046364 monosaccharide biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 1414 1549
IPR002044 CBM_fam20 5 82
IPR013534 Starch_synth_cat_dom 1104 1353
No external refs found!