1. Home
  2. Species
  3. Cyanophora paradoxa
  4. Sequence
  5. Cpa|evm.model.tig00000114.26

Cpa|evm.model.tig00000114.26 (tig00000114_g6037.t1)


Aliases : tig00000114_g6037.t1

Description : Regulator of nonsense transcripts 1 homolog OS=Arabidopsis thaliana


Gene families : OG_01_0000139 (OrthoFinder) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00000114.26
Cluster HCCA: Cluster_149

Target Alias Description ECC score Gene Family Method Actions
PTI_01G04190.1 No alias CbbX, AAA lid domain; ATPase, AAA-type, core [Interproscan]. 0.03 OrthoFinder
Sro51_chlor_g030650.1 CbbX CbbX 0.02 OrthoFinder
lcl|BLLF01002405.1_cds_GFH23953.1_18430 HaLaN_21657, GFH23953 DNA2/NAM7 helicase, AAA domain; ATPase, AAA-type, core;... 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Enrichment
MF GO:0005506 iron ion binding IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
BP GO:0006694 steroid biosynthetic process IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0008202 steroid metabolic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
MF GO:0009055 electron transfer activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0009987 cellular process IEP Enrichment
BP GO:0010207 photosystem II assembly IEP Enrichment
MF GO:0010242 oxygen evolving activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
BP GO:0016043 cellular component organization IEP Enrichment
MF GO:0016229 steroid dehydrogenase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Enrichment
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0022607 cellular component assembly IEP Enrichment
CC GO:0030076 light-harvesting complex IEP Enrichment
CC GO:0030089 phycobilisome IEP Enrichment
CC GO:0032991 protein-containing complex IEP Enrichment
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Enrichment
BP GO:0034622 cellular protein-containing complex assembly IEP Enrichment
BP GO:0043933 protein-containing complex subunit organization IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
MF GO:0051536 iron-sulfur cluster binding IEP Enrichment
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Enrichment
MF GO:0051540 metal cluster binding IEP Enrichment
BP GO:0065003 protein-containing complex assembly IEP Enrichment
BP GO:0071840 cellular component organization or biogenesis IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR041679 DNA2/NAM7-like_C 843 998
IPR041677 DNA2/NAM7_AAA_11 335 808
No external refs found!