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  5. SymbC1.scaffold19379.1

SymbC1.scaffold19379.1 (19379.1)


Aliases : 19379.1

Description : Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA; Carbohydrate kinase PfkB [Interproscan].


Gene families : OG_01_0000559 (OrthoFinder) Phylogenetic Tree(s): OG0000559_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold19379.1
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold2.1430 2.1430 Alkyl hydroperoxide reductase subunit C/ Thiol specific... 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0046872 metal ion binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Enrichment
MF GO:0009982 pseudouridine synthase activity IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
BP GO:0034220 ion transmembrane transport IEP Enrichment
BP GO:0046034 ATP metabolic process IEP Enrichment
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP Enrichment
BP GO:0098655 cation transmembrane transport IEP Enrichment
BP GO:0098660 inorganic ion transmembrane transport IEP Enrichment
BP GO:0098662 inorganic cation transmembrane transport IEP Enrichment
BP GO:1902600 proton transmembrane transport IEP Enrichment
InterPro domains Description Start Stop
IPR001670 ADH_Fe/GldA 8 199
IPR011611 PfkB_dom 254 509
No external refs found!