SymbC1.scaffold193.9 (193.9)

Aliases : 193.9

Description : Ribosomal protein L34Ae [Interproscan].

Gene families : OG_01_0004984 (OrthoFinder) Phylogenetic Tree(s): OG0004984_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold193.9
Cluster	HCCA: Cluster_134

Target	Alias	Description	ECC score	Gene Family Method
Cre16.g661050	30777324, RPL34	Protein biosynthesis.cytosolic ribosome.large subunit...	0.07	OrthoFinder
Dusal.0013s00032.1	33200934	Ribosomal protein L34Ae [Interproscan].	0.09	OrthoFinder
OT_04G04220.1	No alias	Ribosomal protein L34Ae [Interproscan].	0.02	OrthoFinder
PTI_04G00620.1	No alias	Ribosomal protein L34Ae [Interproscan].	0.06	OrthoFinder
Sro327_g118460.1	Contig839.g9254	60S ribosomal protein L34	0.07	OrthoFinder
TP04G05710.1	No alias	Ribosomal protein L34Ae [Interproscan].	0.05	OrthoFinder
Vocar.0004s0133.1	32889701	Ribosomal protein L34Ae [Interproscan].	0.05	OrthoFinder
XM_002504768.1	MICPUN_86588, 86588	Ribosomal protein L34Ae [Interproscan].	0.05	OrthoFinder
lcl\|VRMN01000003.1_cds_KAA8495412.1_1410	KAA8495412	60S ribosomal protein L34	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000154	rRNA modification	IEP	Enrichment
BP	GO:0001510	RNA methylation	IEP	Enrichment
BP	GO:0006364	rRNA processing	IEP	Enrichment
MF	GO:0008173	RNA methyltransferase activity	IEP	Enrichment
MF	GO:0008649	rRNA methyltransferase activity	IEP	Enrichment
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	Enrichment
BP	GO:0016072	rRNA metabolic process	IEP	Enrichment
BP	GO:0031167	rRNA methylation	IEP	Enrichment
BP	GO:0032259	methylation	IEP	Enrichment
BP	GO:0043414	macromolecule methylation	IEP	Enrichment
BP	GO:0070475	rRNA base methylation	IEP	Enrichment
MF	GO:0140102	catalytic activity, acting on a rRNA	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR008195	Ribosomal_L34Ae	1	94

External Links

No external refs found!

SymbC1.scaffold193.9 (193.9)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation