SymbC1.scaffold1911.3 (1911.3)

Aliases : 1911.3

Description : Small GTPase superfamily, ARF/SAR type [Interproscan].

Gene families : OG_01_0000272 (OrthoFinder) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1911.3
Cluster	HCCA: Cluster_143

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000571.48	tig00000571_g2201.t1	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.02	OrthoFinder
Cre12.g535900	30792839, ARL1	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.01	OrthoFinder
XM_003063983.1	MicpuC2_30191, 30191	Small GTPase superfamily, ARF/SAR type [Interproscan].	0.01	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	6	123
IPR006689	Small_GTPase_ARF/SAR	151	216

External Links

No external refs found!