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  5. SymbC1.scaffold1908.12

SymbC1.scaffold1908.12 (1908.12)


Aliases : 1908.12

Description : RAP domain [Interproscan].


Gene families : OG_01_0000025 (OrthoFinder) Phylogenetic Tree(s): OG0000025_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1908.12
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
Cre11.g467649 30775976 No description available 0.02 OrthoFinder
EOD38873 No alias ShKT domain; RAP domain [Interproscan]. 0.02 OrthoFinder
Transcript_contig_89186 89186 RAP domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009523 photosystem II IEP Enrichment
CC GO:0009654 photosystem II oxygen evolving complex IEP Enrichment
BP GO:0010109 regulation of photosynthesis IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
CC GO:0019898 extrinsic component of membrane IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
BP GO:0042548 regulation of photosynthesis, light reaction IEP Enrichment
BP GO:0042549 photosystem II stabilization IEP Enrichment
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
InterPro domains Description Start Stop
IPR013584 RAP 405 459
No external refs found!