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  5. SymbC1.scaffold1888.2

SymbC1.scaffold1888.2 (1888.2)


Aliases : 1888.2

Description : Ankyrin repeat-containing domain; EF-hand domain [Interproscan].


Gene families : OG_01_0004657 (OrthoFinder) Phylogenetic Tree(s): OG0004657_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1888.2

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000254.11 tig00000254_g22458.t1 No description available 0.03 OrthoFinder
Sro2216_g319450.1 Contig4634.g34558 Phosphate transport (Pho88) 0.02 OrthoFinder
TP03G02990.1 No alias Ankyrin repeat-containing domain; SRP-independent... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006664 glycolipid metabolic process IEP Enrichment
BP GO:0006950 response to stress IEP Enrichment
BP GO:0006979 response to oxidative stress IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0009247 glycolipid biosynthetic process IEP Enrichment
MF GO:0016209 antioxidant activity IEP Enrichment
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Enrichment
MF GO:0016757 glycosyltransferase activity IEP Enrichment
MF GO:0016758 hexosyltransferase activity IEP Enrichment
MF GO:0020037 heme binding IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
BP GO:0046467 membrane lipid biosynthetic process IEP Enrichment
MF GO:0046906 tetrapyrrole binding IEP Enrichment
BP GO:0050896 response to stimulus IEP Enrichment
BP GO:1901135 carbohydrate derivative metabolic process IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
BP GO:1903509 liposaccharide metabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 251 306
IPR020683 Ankyrin_rpt-contain_dom 187 242
No external refs found!