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  5. SymbC1.scaffold1885.1

SymbC1.scaffold1885.1 (1885.1)


Aliases : 1885.1

Description : Short-chain dehydrogenase/reductase SDR [Interproscan].


Gene families : OG_01_0000065 (OrthoFinder) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold1885.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Cz19g08150.t1 No alias Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
Dusal.0237s00017.1 33197985 Enoyl-(Acyl carrier protein) reductase [Interproscan]. 0.01 OrthoFinder
Sro1267_g257730.1 Contig3174.g25106 Daunorubicin C-13 ketoreductase DnrU 0.01 OrthoFinder
Sro63_g035640.1 Contig2778.g22329 Short-chain dehydrogenase TIC 32, chloroplastic 0.02 OrthoFinder
XM_002499674.1 MICPUN_55872, 55872 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
XM_002509219.1 MICPUN_106349, 106349 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder
XM_003054753.1 MicpuC2_61092, 61092 Short-chain dehydrogenase/reductase SDR [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006605 protein targeting IEP Enrichment
BP GO:0006612 protein targeting to membrane IEP Enrichment
BP GO:0006613 cotranslational protein targeting to membrane IEP Enrichment
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Enrichment
MF GO:0008312 7S RNA binding IEP Enrichment
CC GO:0032993 protein-DNA complex IEP Enrichment
BP GO:0033365 protein localization to organelle IEP Enrichment
BP GO:0034613 cellular protein localization IEP Enrichment
CC GO:0044815 DNA packaging complex IEP Enrichment
BP GO:0045047 protein targeting to ER IEP Enrichment
CC GO:0048500 signal recognition particle IEP Enrichment
BP GO:0051668 localization within membrane IEP Enrichment
BP GO:0070727 cellular macromolecule localization IEP Enrichment
BP GO:0070972 protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072594 establishment of protein localization to organelle IEP Enrichment
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Enrichment
BP GO:0072657 protein localization to membrane IEP Enrichment
BP GO:0090150 establishment of protein localization to membrane IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR002347 SDR_fam 11 124
No external refs found!