SymbC1.scaffold1842.1 (1842.1)


Aliases : 1842.1

Description : SET domain [Interproscan].


Gene families : OG_01_0000019 (OrthoFinder) Phylogenetic Tree(s): OG0000019_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1842.1
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
EOD22522 No alias SET domain; Zinc finger, MYND-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold2438.2 2438.2 SET domain [Interproscan]. 0.02 OrthoFinder
XM_002502912.1 MICPUN_59496, 59496 SET domain [Interproscan]. 0.02 OrthoFinder
XM_003059174.1 MicpuC2_58860, 58860 SET domain [Interproscan]. 0.02 OrthoFinder
lcl|BLLF01003634.1_cds_GFH27819.1_22296 HaLaN_26201, GFH27819 Hypothetical protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Enrichment
MF GO:0004055 argininosuccinate synthase activity IEP Enrichment
BP GO:0006298 mismatch repair IEP Enrichment
BP GO:0006525 arginine metabolic process IEP Enrichment
BP GO:0006526 arginine biosynthetic process IEP Enrichment
MF GO:0008168 methyltransferase activity IEP Enrichment
CC GO:0009521 photosystem IEP Enrichment
CC GO:0009522 photosystem I IEP Enrichment
CC GO:0009538 photosystem I reaction center IEP Enrichment
MF GO:0015293 symporter activity IEP Enrichment
BP GO:0015979 photosynthesis IEP Enrichment
MF GO:0016289 CoA hydrolase activity IEP Enrichment
MF GO:0016790 thiolester hydrolase activity IEP Enrichment
MF GO:0022804 active transmembrane transporter activity IEP Enrichment
MF GO:0030983 mismatched DNA binding IEP Enrichment
CC GO:0098796 membrane protein complex IEP Enrichment
InterPro domains Description Start Stop
IPR001214 SET_dom 162 214
No external refs found!