1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold1839.2

SymbC1.scaffold1839.2 (1839.2)


Aliases : 1839.2

Description : Glucosamine/galactosamine-6-phosphate isomerase; ERCC4 domain [Interproscan].


Gene families : OG_01_0001186 (OrthoFinder) Phylogenetic Tree(s): OG0001186_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1839.2
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
Sro10_g008360.1 Contig1.g60 Probable 6-phosphogluconolactonase 0.01 OrthoFinder
TP16G00580.1 No alias Glucosamine/galactosamine-6-phosphate isomerase [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0004518 nuclease activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP Enrichment
CC GO:0009507 chloroplast IEP Enrichment
CC GO:0009536 plastid IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
MF GO:0042802 identical protein binding IEP Enrichment
MF GO:0046422 violaxanthin de-epoxidase activity IEP Enrichment
MF GO:0070569 uridylyltransferase activity IEP Enrichment
InterPro domains Description Start Stop
IPR006148 Glc/Gal-6P_isomerase 701 928
IPR006166 ERCC4_domain 269 415
No external refs found!