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  5. SymbC1.scaffold1828.1

SymbC1.scaffold1828.1 (1828.1)


Aliases : 1828.1

Description : Acyl-CoA dehydrogenase/oxidase, N-terminal; Cytochrome b5-like heme/steroid binding domain; Acyl-CoA oxidase/dehydrogenase, central domain [Interproscan].


Gene families : OG_01_0000190 (OrthoFinder) Phylogenetic Tree(s): OG0000190_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold1828.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
Sro1037_g234200.1 Contig2347.g19309 Short-chain specific acyl-CoA dehydrogenase, mitochondrial 0.01 OrthoFinder
Transcript_contig_58396 58396 Acyl-CoA dehydrogenase/oxidase, N-terminal; Acyl-CoA... 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004489 methylenetetrahydrofolate reductase (NAD(P)H) activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
CC GO:0005576 extracellular region IEP Enrichment
BP GO:0006099 tricarboxylic acid cycle IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006555 methionine metabolic process IEP Enrichment
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
MF GO:0016409 palmitoyltransferase activity IEP Enrichment
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Enrichment
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Enrichment
MF GO:0016830 carbon-carbon lyase activity IEP Enrichment
MF GO:0016832 aldehyde-lyase activity IEP Enrichment
MF GO:0030247 polysaccharide binding IEP Enrichment
MF GO:0030248 cellulose binding IEP Enrichment
InterPro domains Description Start Stop
IPR013786 AcylCoA_DH/ox_N 115 255
IPR001199 Cyt_B5-like_heme/steroid-bd 5 76
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 270 308
No external refs found!