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Aliases : 1790.1
Description : Hypothetical protein
Gene families : OG_01_0000058 (OrthoFinder) Phylogenetic Tree(s): OG0000058_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: SymbC1.scaffold1790.1 | |
| Cluster | HCCA: Cluster_501 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| SymbC1.scaffold10380.1 | 10380.1 | Integrase, catalytic core [Interproscan]. | 0.05 | OrthoFinder | |
| SymbC1.scaffold13830.1 | 13830.1 | Hypothetical protein | 0.03 | OrthoFinder | |
| SymbC1.scaffold1555.1 | 1555.1 | Zinc finger, CCHC-type [Interproscan]. | 0.06 | OrthoFinder | |
| SymbC1.scaffold166.9 | 166.9 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold1947.9 | 1947.9 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold277.5 | 277.5 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold280.3 | 280.3 | Reverse transcriptase, RNA-dependent DNA polymerase... | 0.04 | OrthoFinder | |
| SymbC1.scaffold3612.1 | 3612.1 | Zinc finger, CCHC-type [Interproscan]. | 0.05 | OrthoFinder | |
| SymbC1.scaffold3641.3 | 3641.3 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold372.4 | 372.4 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold3876.2 | 3876.2 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold4165.2 | 4165.2 | Zinc finger, CCHC-type [Interproscan]. | 0.03 | OrthoFinder | |
| SymbC1.scaffold5249.3 | 5249.3 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold5422.1 | 5422.1 | Hypothetical protein | 0.03 | OrthoFinder | |
| SymbC1.scaffold550.3 | 550.3 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold6253.2 | 6253.2 | Zinc finger, CCHC-type [Interproscan]. | 0.06 | OrthoFinder | |
| SymbC1.scaffold692.1 | 692.1 | Hypothetical protein | 0.04 | OrthoFinder | |
| SymbC1.scaffold6954.1 | 6954.1 | Hypothetical protein | 0.02 | OrthoFinder | |
| SymbC1.scaffold7099.2 | 7099.2 | Hypothetical protein | 0.03 | OrthoFinder | |
| SymbC1.scaffold7159.4 | 7159.4 | C-5 cytosine methyltransferase; Zinc finger, CCHC-type... | 0.02 | OrthoFinder | |
| SymbC1.scaffold720.6 | 720.6 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold721.4 | 721.4 | Hypothetical protein | 0.03 | OrthoFinder | |
| SymbC1.scaffold7247.3 | 7247.3 | Zinc finger, CCHC-type [Interproscan]. | 0.04 | OrthoFinder | |
| SymbC1.scaffold7411.1 | 7411.1 | Hypothetical protein | 0.02 | OrthoFinder | |
| SymbC1.scaffold8765.4 | 8765.4 | Hypothetical protein | 0.05 | OrthoFinder | |
| SymbC1.scaffold9481.1 | 9481.1 | Hypothetical protein | 0.05 | OrthoFinder | |
| SymbC1.scaffold9803.2 | 9803.2 | Zinc finger, CCHC-type [Interproscan]. | 0.06 | OrthoFinder |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000723 | telomere maintenance | IEP | Enrichment |
| MF | GO:0003676 | nucleic acid binding | IEP | Enrichment |
| MF | GO:0003896 | DNA primase activity | IEP | Enrichment |
| MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Enrichment |
| MF | GO:0005283 | amino acid:sodium symporter activity | IEP | Enrichment |
| MF | GO:0005342 | organic acid transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0005343 | organic acid:sodium symporter activity | IEP | Enrichment |
| MF | GO:0005416 | amino acid:cation symporter activity | IEP | Enrichment |
| BP | GO:0006270 | DNA replication initiation | IEP | Enrichment |
| BP | GO:0006275 | regulation of DNA replication | IEP | Enrichment |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Enrichment |
| BP | GO:0006814 | sodium ion transport | IEP | Enrichment |
| BP | GO:0006865 | amino acid transport | IEP | Enrichment |
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Enrichment |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Enrichment |
| BP | GO:0010468 | regulation of gene expression | IEP | Enrichment |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Enrichment |
| MF | GO:0015081 | sodium ion transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015171 | amino acid transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015175 | neutral amino acid transmembrane transporter activity | IEP | Enrichment |
| MF | GO:0015294 | solute:cation symporter activity | IEP | Enrichment |
| MF | GO:0015370 | solute:sodium symporter activity | IEP | Enrichment |
| MF | GO:0015655 | alanine:sodium symporter activity | IEP | Enrichment |
| BP | GO:0015711 | organic anion transport | IEP | Enrichment |
| BP | GO:0015804 | neutral amino acid transport | IEP | Enrichment |
| MF | GO:0016407 | acetyltransferase activity | IEP | Enrichment |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Enrichment |
| MF | GO:0016747 | acyltransferase activity, transferring groups other than amino-acyl groups | IEP | Enrichment |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | Enrichment |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Enrichment |
| BP | GO:0019222 | regulation of metabolic process | IEP | Enrichment |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | Enrichment |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Enrichment |
| MF | GO:0022858 | alanine transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Enrichment |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Enrichment |
| BP | GO:0032200 | telomere organization | IEP | Enrichment |
| BP | GO:0032328 | alanine transport | IEP | Enrichment |
| BP | GO:0032774 | RNA biosynthetic process | IEP | Enrichment |
| CC | GO:0033178 | proton-transporting two-sector ATPase complex, catalytic domain | IEP | Enrichment |
| MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Enrichment |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | Enrichment |
| BP | GO:0042254 | ribosome biogenesis | IEP | Enrichment |
| BP | GO:0044085 | cellular component biogenesis | IEP | Enrichment |
| CC | GO:0045261 | proton-transporting ATP synthase complex, catalytic core F(1) | IEP | Enrichment |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | Enrichment |
| BP | GO:0046417 | chorismate metabolic process | IEP | Enrichment |
| BP | GO:0046942 | carboxylic acid transport | IEP | Enrichment |
| MF | GO:0046943 | carboxylic acid transmembrane transporter activity | IEP | Enrichment |
| BP | GO:0050789 | regulation of biological process | IEP | Enrichment |
| BP | GO:0050794 | regulation of cellular process | IEP | Enrichment |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Enrichment |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Enrichment |
| BP | GO:0060249 | anatomical structure homeostasis | IEP | Enrichment |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Enrichment |
| BP | GO:0065007 | biological regulation | IEP | Enrichment |
| BP | GO:0071702 | organic substance transport | IEP | Enrichment |
| BP | GO:0071705 | nitrogen compound transport | IEP | Enrichment |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Enrichment |
| MF | GO:0097747 | RNA polymerase activity | IEP | Enrichment |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | Enrichment |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Enrichment |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Enrichment |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Enrichment |
No InterPro domains available for this sequence
| No external refs found! |