SymbC1.scaffold1781.9 (1781.9)

Aliases : 1781.9

Description : Integrase zinc-binding domain; Phospholipase D-like domain; Reverse transcriptase, RNase H-like domain; Integrase, catalytic core [Interproscan].

Gene families : OG_01_0007243 (OrthoFinder) Phylogenetic Tree(s): OG0007243_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1781.9
Cluster	HCCA: Cluster_158

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015074	DNA integration	IEA	Interproscan
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001584	Integrase_cat-core	2158	2252
IPR041373	RT_RNaseH	1449	1543
IPR025202	PLD-like_dom	4167	4294
IPR041588	Integrase_H2C2	2072	2126

External Links

No external refs found!

SymbC1.scaffold1781.9 (1781.9)

Expression Profile

Co-expression Networks

Functional Annotation