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  5. SymbC1.scaffold178.6

SymbC1.scaffold178.6 (178.6)


Aliases : 178.6

Description : Zinc finger, RING-type [Interproscan].


Gene families : OG_01_0000005 (OrthoFinder) Phylogenetic Tree(s): OG0000005_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold178.6
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021017.21 tig00021017_g17196.t1 No description available 0.01 OrthoFinder
Cz09g32220.t1 No alias Zinc finger, RING-type [Interproscan]. 0.01 OrthoFinder
SymbC1.scaffold1145.3 1145.3 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
SymbC1.scaffold6896.1 6896.1 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder
XM_003055570.1 MicpuC2_38033, 38033 Zinc finger, RING-type [Interproscan]. 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Enrichment
BP GO:0006643 membrane lipid metabolic process IEP Enrichment
BP GO:0006665 sphingolipid metabolic process IEP Enrichment
BP GO:0006672 ceramide metabolic process IEP Enrichment
MF GO:0043015 gamma-tubulin binding IEP Enrichment
InterPro domains Description Start Stop
IPR001841 Znf_RING 269 314
No external refs found!