SymbC1.scaffold1767.3 (1767.3)

Aliases : 1767.3

Description : Cyclic nucleotide-binding domain [Interproscan].

Gene families : OG_01_0000277 (OrthoFinder) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1767.3
Cluster	HCCA: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000405.25	tig00000405_g458.t1	No description available	0.02	OrthoFinder
Cpa\|evm.model.tig00000802.40	tig00000802_g4289.t1	No description available	0.03	OrthoFinder
Cpa\|evm.model.tig00020801.87	tig00020801_g13969.t2	Protein phosphatase 2C and cyclic...	0.01	OrthoFinder
TP09G03410.1	No alias	Cyclic nucleotide-binding domain [Interproscan].	0.02	OrthoFinder
XM_003058367.1	MicpuC2_33413, 33413	Protein kinase domain; Cyclic nucleotide-binding domain...	0.02	OrthoFinder
XM_003061210.1	MicpuC2_63465, 63465	Cyclic nucleotide-binding domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000019.1_cds_PRW32677.1_4006	PRW32677	Camp-dependent kinase regulatorysubunit	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0008081	phosphoric diester hydrolase activity	IEP	Enrichment
BP	GO:0016192	vesicle-mediated transport	IEP	Enrichment
BP	GO:0016197	endosomal transport	IEP	Enrichment
BP	GO:0016482	cytosolic transport	IEP	Enrichment
CC	GO:0030906	retromer, cargo-selective complex	IEP	Enrichment
BP	GO:0042147	retrograde transport, endosome to Golgi	IEP	Enrichment
BP	GO:0046907	intracellular transport	IEP	Enrichment
BP	GO:0051641	cellular localization	IEP	Enrichment
BP	GO:0051649	establishment of localization in cell	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR000595	cNMP-bd_dom	150	226
IPR000595	cNMP-bd_dom	295	386
IPR000595	cNMP-bd_dom	423	464

External Links

No external refs found!