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  5. SymbC1.scaffold1753.10

SymbC1.scaffold1753.10 (1753.10)


Aliases : 1753.10

Description : Ribosomal protein S7e [Interproscan].


Gene families : OG_01_0003112 (OrthoFinder) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1753.10
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021682.9 tig00021682_g23099.t1 Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder
Cre12.g498900 30792089, RPS7 Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder
Cz02g24040.t1 No alias Ribosomal protein S7e [Interproscan]. 0.03 OrthoFinder
Dusal.0024s00020.1 33202211 Ribosomal protein S7e [Interproscan]. 0.02 OrthoFinder
OT_09G03160.1 No alias Ribosomal protein S7e [Interproscan]. 0.08 OrthoFinder
PTI_28G01270.1 No alias Ribosomal protein S7e [Interproscan]. 0.07 OrthoFinder
Sro730_g194010.1 Contig80.g833 40S ribosomal protein S7 0.07 OrthoFinder
TP02G05030.1 No alias Ribosomal protein S7e [Interproscan]. 0.09 OrthoFinder
Vocar.0006s0277.1 32894204 Ribosomal protein S7e [Interproscan]. 0.03 OrthoFinder
XM_002508754.1 MICPUN_91845, 91845 Ribosomal protein S7e [Interproscan]. 0.07 OrthoFinder
XM_003056772.1 MicpuC2_46695, 46695 Ribosomal protein S7e [Interproscan]. 0.03 OrthoFinder
lcl|LHPG02000024.1_cds_PRW20375.1_5582 PRW20375 40S ribosomal S7 isoform A 0.05 OrthoFinder
lcl|VRMN01000004.1_cds_KAA8494704.1_3234 KAA8494704 40S ribosomal protein S7 0.08 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEP Enrichment
CC GO:0005743 mitochondrial inner membrane IEP Enrichment
CC GO:0005750 mitochondrial respiratory chain complex III IEP Enrichment
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Enrichment
BP GO:0006275 regulation of DNA replication IEP Enrichment
MF GO:0008097 5S rRNA binding IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
CC GO:0015934 large ribosomal subunit IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
BP GO:0019646 aerobic electron transport chain IEP Enrichment
MF GO:0019843 rRNA binding IEP Enrichment
CC GO:0019866 organelle inner membrane IEP Enrichment
BP GO:0022900 electron transport chain IEP Enrichment
BP GO:0022904 respiratory electron transport chain IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0031966 mitochondrial membrane IEP Enrichment
MF GO:0035091 phosphatidylinositol binding IEP Enrichment
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Enrichment
CC GO:0044391 ribosomal subunit IEP Enrichment
CC GO:0045275 respiratory chain complex III IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
CC GO:0070069 cytochrome complex IEP Enrichment
MF GO:0071949 FAD binding IEP Enrichment
CC GO:0098798 mitochondrial protein-containing complex IEP Enrichment
CC GO:0098800 inner mitochondrial membrane protein complex IEP Enrichment
CC GO:0098803 respiratory chain complex IEP Enrichment
CC GO:1990204 oxidoreductase complex IEP Enrichment
CC GO:1990904 ribonucleoprotein complex IEP Enrichment
InterPro domains Description Start Stop
IPR000554 Ribosomal_S7e 7 185
No external refs found!