SymbC1.scaffold1732.5 (1732.5)

Aliases : 1732.5

Description : SNF2-related, N-terminal domain; Helicase, C-terminal [Interproscan].

Gene families : OG_01_0000017 (OrthoFinder) Phylogenetic Tree(s): OG0000017_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1732.5

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00000863.2	tig00000863_g4959.t1	TATA-binding protein-associated factor BTAF1...	0.01	OrthoFinder
Cpa\|evm.model.tig00021275.25	tig00021275_g19885.t1	Probable chromatin-remodeling complex ATPase chain...	0.01	OrthoFinder
Cz05g37180.t1	No alias	SNF2-related, N-terminal domain; Helicase, C-terminal...	0.01	OrthoFinder
Cz19g07040.t1	No alias	Helicase, C-terminal; SNF2-related, N-terminal domain;...	0.01	OrthoFinder
EOD36957	No alias	Helicase, C-terminal; SNF2-related, N-terminal domain...	0.01	OrthoFinder
TP06G01980.1	No alias	SNF2-related, N-terminal domain; Helicase, C-terminal...	0.06	OrthoFinder
TP12G03300.1	No alias	SNF2-related, N-terminal domain; Chromo domain;...	0.01	OrthoFinder
Vocar.0004s0442.1	32889776	Helicase, C-terminal; SNF2-related, N-terminal domain...	0.01	OrthoFinder
Vocar.0032s0115.1	32893725	Helicase, C-terminal; SNF2-related, N-terminal domain...	0.02	OrthoFinder
XM_002507782.1	MICPUN_60518, 60518	SNF2 super family	0.01	OrthoFinder
lcl\|BLLF01006096.1_cds_GFH31943.1_26420	HaLaN_31078, GFH31943	SNF2-related, N-terminal domain [Interproscan].	0.02	OrthoFinder
lcl\|LHPG02000008.1_cds_PRW56604.1_9911	PRW56604	CHROMATIN REMODELING 19	0.01	OrthoFinder
lcl\|VRMN01000004.1_cds_KAA8494382.1_2912	KAA8494382	ISWI chromatin-remodeling complex ATPase CHR17	0.04	OrthoFinder
lcl\|VRMN01000010.1_cds_KAA8492149.1_5332	KAA8492149	Chromodomain-helicase-DNA-binding protein 6	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR001650	Helicase_C	245	348
IPR000330	SNF2_N	9	171

External Links

No external refs found!