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  5. SymbC1.scaffold172.60

SymbC1.scaffold172.60 (172.60)


Aliases : 172.60

Description : Enoyl-(Acyl carrier protein) reductase; Class II aldolase/adducin N-terminal; TRAP transporter solute receptor DctP/TeaA; TRAP C4-dicarboxylate transport system permease DctM subunit; TRAP transporter, small membrane protein DctQ [Interproscan].


Gene families : OG_01_0003919 (OrthoFinder) Phylogenetic Tree(s): OG0003919_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold172.60
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4.1074 4.1074 TRAP C4-dicarboxylate transport system permease DctM... 0.03 OrthoFinder
SymbC1.scaffold4.601 4.601 TRAP transporter T-component; Alkyl hydroperoxide... 0.04 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Enrichment
MF GO:0003674 molecular_function IEP Enrichment
MF GO:0003677 DNA binding IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003896 DNA primase activity IEP Enrichment
MF GO:0004177 aminopeptidase activity IEP Enrichment
MF GO:0004386 helicase activity IEP Enrichment
MF GO:0004514 nicotinate-nucleotide diphosphorylase (carboxylating) activity IEP Enrichment
MF GO:0004529 exodeoxyribonuclease activity IEP Enrichment
MF GO:0004635 phosphoribosyl-AMP cyclohydrolase activity IEP Enrichment
MF GO:0004817 cysteine-tRNA ligase activity IEP Enrichment
MF GO:0004834 tryptophan synthase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005384 manganese ion transmembrane transporter activity IEP Enrichment
CC GO:0005575 cellular_component IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006308 DNA catabolic process IEP Enrichment
BP GO:0006423 cysteinyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006720 isoprenoid metabolic process IEP Enrichment
BP GO:0006725 cellular aromatic compound metabolic process IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
MF GO:0008094 ATPase, acting on DNA IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
MF GO:0008233 peptidase activity IEP Enrichment
MF GO:0008236 serine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0008299 isoprenoid biosynthetic process IEP Enrichment
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Enrichment
MF GO:0008855 exodeoxyribonuclease VII activity IEP Enrichment
MF GO:0008987 quinolinate synthetase A activity IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009061 anaerobic respiration IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
CC GO:0009318 exodeoxyribonuclease VII complex IEP Enrichment
BP GO:0009435 NAD biosynthetic process IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
MF GO:0016744 transketolase or transaldolase activity IEP Enrichment
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Enrichment
MF GO:0016787 hydrolase activity IEP Enrichment
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Enrichment
MF GO:0016887 ATPase IEP Enrichment
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Enrichment
MF GO:0017171 serine hydrolase activity IEP Enrichment
BP GO:0019359 nicotinamide nucleotide biosynthetic process IEP Enrichment
BP GO:0019362 pyridine nucleotide metabolic process IEP Enrichment
BP GO:0019363 pyridine nucleotide biosynthetic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0030026 cellular manganese ion homeostasis IEP Enrichment
BP GO:0034641 cellular nitrogen compound metabolic process IEP Enrichment
BP GO:0042592 homeostatic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0046483 heterocycle metabolic process IEP Enrichment
BP GO:0046496 nicotinamide nucleotide metabolic process IEP Enrichment
MF GO:0050661 NADP binding IEP Enrichment
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Enrichment
BP GO:0055071 manganese ion homeostasis IEP Enrichment
BP GO:0055114 obsolete oxidation-reduction process IEP Enrichment
BP GO:0065007 biological regulation IEP Enrichment
BP GO:0065008 regulation of biological quality IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
BP GO:0072524 pyridine-containing compound metabolic process IEP Enrichment
BP GO:0072525 pyridine-containing compound biosynthetic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
CC GO:0110165 cellular anatomical entity IEP Enrichment
MF GO:0140097 catalytic activity, acting on DNA IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
BP GO:1901360 organic cyclic compound metabolic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR010656 DctM 1107 1515
IPR007387 TRAP_DctQ 979 1094
IPR001303 Aldolase_II/adducin_N 30 224
IPR018389 DctP_fam 828 945
No external refs found!