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  5. SymbC1.scaffold1711.4

SymbC1.scaffold1711.4 (1711.4)


Aliases : 1711.4

Description : Squalene cyclase, N-terminal; Squalene cyclase, C-terminal [Interproscan].


Gene families : OG_01_0002032 (OrthoFinder) Phylogenetic Tree(s): OG0002032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1711.4
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
EOD19904 No alias Squalene cyclase, N-terminal; Squalene cyclase,... 0.02 OrthoFinder
TP02G06720.1 No alias Squalene cyclase, C-terminal; Squalene cyclase,... 0.01 OrthoFinder
lcl|BLLF01001598.1_cds_GFH20225.1_14702 HaLaN_17313, GFH20225 SQHop_cyclase_C domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004451 isocitrate lyase activity IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
MF GO:0008519 ammonium transmembrane transporter activity IEP Enrichment
BP GO:0015696 ammonium transport IEP Enrichment
CC GO:0016020 membrane IEP Enrichment
MF GO:0016833 oxo-acid-lyase activity IEP Enrichment
InterPro domains Description Start Stop
IPR032697 SQ_cyclase_N 144 389
IPR032696 SQ_cyclase_C 454 791
No external refs found!