SymbC1.scaffold170.11 (170.11)

Aliases : 170.11

Description : ABC transporter-like; Clp, N-terminal; Clp ATPase, C-terminal; ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain [Interproscan].

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold170.11
Cluster	HCCA: Cluster_110

Target	Alias	Description	ECC score	Gene Family Method	Actions
lcl\|VRMN01000002.1_cds_KAA8497241.1_970	KAA8497241	Chaperone protein ClpB	0.02	OrthoFinder
lcl\|VRMN01000011.1_cds_KAA8491801.1_4809	KAA8491801	Chaperone protein ClpB 2	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	245	275
IPR004176	Clp_R_dom	169	221
IPR003439	ABC_transporter-like_ATP-bd	1079	1227
IPR003959	ATPase_AAA_core	749	928
IPR003959	ATPase_AAA_core	374	495
IPR019489	Clp_ATPase_C	934	1014
IPR041546	ClpA/ClpB_AAA_lid	518	617

External Links

No external refs found!