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  5. SymbC1.scaffold1693.2

SymbC1.scaffold1693.2 (1693.2)


Aliases : 1693.2

Description : EF-hand domain; Bestrophin/UPF0187 [Interproscan].


Gene families : OG_01_0000064 (OrthoFinder) Phylogenetic Tree(s): OG0000064_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold1693.2
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
EOD07308 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
PTI_05G03790.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.01 OrthoFinder
PTI_10G00030.1 No alias Bestrophin/UPF0187 [Interproscan]. 0.02 OrthoFinder
XM_002507047.1 MICPUN_54949, 54949 Bestrophin/UPF0187 [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
MF GO:0003887 DNA-directed DNA polymerase activity IEP Enrichment
MF GO:0004721 phosphoprotein phosphatase activity IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030976 thiamine pyrophosphate binding IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
MF GO:0034061 DNA polymerase activity IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
MF GO:1901681 sulfur compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 482 541
IPR021134 Bestrophin/UPF0187 106 370
No external refs found!