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  5. SymbC1.scaffold166.9

SymbC1.scaffold166.9 (166.9)


Aliases : 166.9

Description : Zinc finger, CCHC-type [Interproscan].


Gene families : OG_01_0000058 (OrthoFinder) Phylogenetic Tree(s): OG0000058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold166.9
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1030.5 1030.5 Zinc finger, CCHC-type; Reverse transcriptase,... 0.05 OrthoFinder
SymbC1.scaffold10380.1 10380.1 Integrase, catalytic core [Interproscan]. 0.07 OrthoFinder
SymbC1.scaffold11335.1 11335.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold12679.1 12679.1 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold13830.1 13830.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold1555.1 1555.1 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold1790.1 1790.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold1947.9 1947.9 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold2297.4 2297.4 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold277.5 277.5 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold280.3 280.3 Reverse transcriptase, RNA-dependent DNA polymerase... 0.03 OrthoFinder
SymbC1.scaffold301.14 301.14 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold3082.1 3082.1 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold3641.3 3641.3 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold372.4 372.4 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold4098.6 4098.6 Zinc finger, CCHC-type [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold550.3 550.3 Zinc finger, CCHC-type [Interproscan]. 0.05 OrthoFinder
SymbC1.scaffold6253.2 6253.2 Zinc finger, CCHC-type [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold692.1 692.1 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold6954.1 6954.1 Hypothetical protein 0.05 OrthoFinder
SymbC1.scaffold721.4 721.4 Hypothetical protein 0.04 OrthoFinder
SymbC1.scaffold8765.4 8765.4 Hypothetical protein 0.03 OrthoFinder
SymbC1.scaffold9481.1 9481.1 Hypothetical protein 0.06 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Enrichment
MF GO:0008484 sulfuric ester hydrolase activity IEP Enrichment
BP GO:0009060 aerobic respiration IEP Enrichment
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Enrichment
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
BP GO:0045333 cellular respiration IEP Enrichment
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 349 364
No external refs found!