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  5. SymbC1.scaffold16515.1

SymbC1.scaffold16515.1 (16515.1)


Aliases : 16515.1

Description : Transcription factor, GTP-binding domain [Interproscan].


Gene families : OG_01_0000147 (OrthoFinder) Phylogenetic Tree(s): OG0000147_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold16515.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
Cre06.g284750 30779093, EFG3 Protein biosynthesis.translation termination.eRF3... 0.01 OrthoFinder
Cz02g32220.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.01 OrthoFinder
Cz11g25130.t1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
EOD35459 No alias Putative EF-1 alpha/Tu like protein [Ensembl]. 0.01 OrthoFinder
OT_13G02300.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.01 OrthoFinder
Sro211_g087850.1 Contig2667.g21577 Elongation factor 1-alpha (Fragment) 0.01 OrthoFinder
Sro296_g110680.1 Contig440.g5907 Elongation factor 1-alpha (Fragment) 0.01 OrthoFinder
Sro433_g141890.1 Contig4540.g33951 Elongation factor 1-alpha (Fragment) 0.01 OrthoFinder
TP05G05990.1 No alias Translation elongation factor EFTu/EF1A, C-terminal;... 0.02 OrthoFinder
lcl|LHPG02000010.1_cds_PRW50937.1_1128 PRW50937 Eukaryotic translation elongation factor 1 alpha 2 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Enrichment
CC GO:0000159 protein phosphatase type 2A complex IEP Enrichment
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Enrichment
MF GO:0003883 CTP synthase activity IEP Enrichment
MF GO:0004019 adenylosuccinate synthase activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0004813 alanine-tRNA ligase activity IEP Enrichment
MF GO:0005524 ATP binding IEP Enrichment
CC GO:0005963 magnesium-dependent protein serine/threonine phosphatase complex IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006073 cellular glucan metabolic process IEP Enrichment
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Enrichment
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Enrichment
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Enrichment
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006419 alanyl-tRNA aminoacylation IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
CC GO:0008287 protein serine/threonine phosphatase complex IEP Enrichment
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Enrichment
BP GO:0009250 glucan biosynthetic process IEP Enrichment
BP GO:0009251 glucan catabolic process IEP Enrichment
BP GO:0015977 carbon fixation IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
CC GO:0016459 myosin complex IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016874 ligase activity IEP Enrichment
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Enrichment
CC GO:0018995 host cellular component IEP Enrichment
MF GO:0019888 protein phosphatase regulator activity IEP Enrichment
BP GO:0030243 cellulose metabolic process IEP Enrichment
BP GO:0030245 cellulose catabolic process IEP Enrichment
MF GO:0030554 adenyl nucleotide binding IEP Enrichment
MF GO:0032559 adenyl ribonucleotide binding IEP Enrichment
CC GO:0033643 host cell part IEP Enrichment
CC GO:0033646 host intracellular part IEP Enrichment
CC GO:0033647 host intracellular organelle IEP Enrichment
CC GO:0033648 host intracellular membrane-bounded organelle IEP Enrichment
MF GO:0035251 UDP-glucosyltransferase activity IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
CC GO:0042025 host cell nucleus IEP Enrichment
BP GO:0044042 glucan metabolic process IEP Enrichment
BP GO:0044247 cellular polysaccharide catabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0044262 cellular carbohydrate metabolic process IEP Enrichment
BP GO:0044264 cellular polysaccharide metabolic process IEP Enrichment
BP GO:0044275 cellular carbohydrate catabolic process IEP Enrichment
MF GO:0046527 glucosyltransferase activity IEP Enrichment
BP GO:0051273 beta-glucan metabolic process IEP Enrichment
BP GO:0051274 beta-glucan biosynthetic process IEP Enrichment
BP GO:0051275 beta-glucan catabolic process IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
CC GO:1902494 catalytic complex IEP Enrichment
CC GO:1903293 phosphatase complex IEP Enrichment
InterPro domains Description Start Stop
IPR000795 T_Tr_GTP-bd_dom 7 123
No external refs found!