SymbC1.scaffold160.52 (160.52)

Aliases : 160.52

Description : Cupin 2, conserved barrel; ABC transporter-like; Polyketide cyclase SnoaL-like; Alpha/beta hydrolase fold-1 [Interproscan].

Gene families : OG_01_0000256 (OrthoFinder) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold160.52
Cluster	HCCA: Cluster_147

Target	Alias	Description	ECC score	Gene Family Method
SymbC1.scaffold109.47	109.47	Bacterial extracellular solute-binding protein [Interproscan].	0.04	OrthoFinder
SymbC1.scaffold14655.2	14655.2	ABC transporter-like; Phospholipid/glycerol...	0.03	OrthoFinder
SymbC1.scaffold217.29	217.29	ABC-2 family transporter protein; HlyD family secretion...	0.03	OrthoFinder
SymbC1.scaffold22.97	22.97	Transport-associated OB, type 2; ABC transporter-like;...	0.03	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016887	ATPase	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
BP	GO:0030638	polyketide metabolic process	IEA	Interproscan
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003937	IMP cyclohydrolase activity	IEP	Enrichment
MF	GO:0004560	alpha-L-fucosidase activity	IEP	Enrichment
MF	GO:0004643	phosphoribosylaminoimidazolecarboxamide formyltransferase activity	IEP	Enrichment
BP	GO:0006629	lipid metabolic process	IEP	Enrichment
MF	GO:0008963	phospho-N-acetylmuramoyl-pentapeptide-transferase activity	IEP	Enrichment
MF	GO:0015928	fucosidase activity	IEP	Enrichment
MF	GO:0016742	hydroxymethyl-, formyl- and related transferase activity	IEP	Enrichment
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	IEP	Enrichment
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	Enrichment
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	Enrichment
BP	GO:0017004	cytochrome complex assembly	IEP	Enrichment
MF	GO:0019238	cyclohydrolase activity	IEP	Enrichment
MF	GO:0019842	vitamin binding	IEP	Enrichment
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Enrichment
BP	GO:0034622	cellular protein-containing complex assembly	IEP	Enrichment
BP	GO:0043933	protein-containing complex subunit organization	IEP	Enrichment
BP	GO:0065003	protein-containing complex assembly	IEP	Enrichment
MF	GO:1901681	sulfur compound binding	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR013096	Cupin_2	437	501
IPR009959	Cyclase_SnoaL-like	916	1040
IPR009959	Cyclase_SnoaL-like	1051	1170
IPR003439	ABC_transporter-like_ATP-bd	20	161
IPR000073	AB_hydrolase_1	673	891

External Links

No external refs found!