1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold160.49

SymbC1.scaffold160.49 (160.49)


Aliases : 160.49

Description : Bacterial extracellular solute-binding protein; ABC transporter type 1, transmembrane domain MetI-like [Interproscan].


Gene families : OG_01_0000256 (OrthoFinder) Phylogenetic Tree(s): OG0000256_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold160.49
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold109.102 109.102 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
SymbC1.scaffold109.3 109.3 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder
SymbC1.scaffold109.44 109.44 Bacterial extracellular solute-binding protein [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold25.183 25.183 ABC transporter type 1, transmembrane domain MetI-like;... 0.03 OrthoFinder
SymbC1.scaffold70.41 70.41 Bacterial extracellular solute-binding protein; ABC... 0.05 OrthoFinder
SymbC1.scaffold70.70 70.70 ABC transporter type 1, transmembrane domain MetI-like;... 0.03 OrthoFinder
SymbC1.scaffold73.50 73.50 ABC transporter-like; ABC transporter type 1,... 0.03 OrthoFinder

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Enrichment
MF GO:0003824 catalytic activity IEP Enrichment
BP GO:0005976 polysaccharide metabolic process IEP Enrichment
BP GO:0006164 purine nucleotide biosynthetic process IEP Enrichment
BP GO:0006188 IMP biosynthetic process IEP Enrichment
BP GO:0006189 'de novo' IMP biosynthetic process IEP Enrichment
BP GO:0009057 macromolecule catabolic process IEP Enrichment
BP GO:0009123 nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009124 nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009126 purine nucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009127 purine nucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009152 purine ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009156 ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009161 ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009167 purine ribonucleoside monophosphate metabolic process IEP Enrichment
BP GO:0009168 purine ribonucleoside monophosphate biosynthetic process IEP Enrichment
BP GO:0009260 ribonucleotide biosynthetic process IEP Enrichment
BP GO:0009306 protein secretion IEP Enrichment
BP GO:0016052 carbohydrate catabolic process IEP Enrichment
MF GO:0016835 carbon-oxygen lyase activity IEP Enrichment
MF GO:0016836 hydro-lyase activity IEP Enrichment
BP GO:0032940 secretion by cell IEP Enrichment
BP GO:0035592 establishment of protein localization to extracellular region IEP Enrichment
BP GO:0046040 IMP metabolic process IEP Enrichment
BP GO:0046390 ribose phosphate biosynthetic process IEP Enrichment
BP GO:0046903 secretion IEP Enrichment
MF GO:0052855 ADP-dependent NAD(P)H-hydrate dehydratase activity IEP Enrichment
BP GO:0071692 protein localization to extracellular region IEP Enrichment
BP GO:0072522 purine-containing compound biosynthetic process IEP Enrichment
BP GO:0140352 export from cell IEP Enrichment
BP GO:1901137 carbohydrate derivative biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR006059 SBP 67 291
IPR000515 MetI-like 527 667
IPR000515 MetI-like 909 1116
No external refs found!