1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold1563.3

SymbC1.scaffold1563.3 (1563.3)


Aliases : 1563.3

Description : Dynein heavy chain region D6 P-loop domain; Dynein heavy chain, coiled coil stalk; Dynein heavy chain, ATP-binding dynein motor region; Dynein heavy chain, C-terminal domain; Dynein heavy chain AAA lid domain; Dynein heavy chain, AAA module D4 [Interproscan].


Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1563.3
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000828.5 tig00000828_g4605.t1 Dynein alpha chain, flagellar outer arm OS=Chlamydomonas... 0.01 OrthoFinder
Dusal.0002s00064.1 33187976 Dynein heavy chain AAA lid domain; Dynein heavy chain... 0.01 OrthoFinder
Dusal.0184s00016.1 33197100 Dynein heavy chain 3, AAA+ lid domain; Dynein heavy... 0.01 OrthoFinder
Dusal.0266s00011.1 33203126 Dynein heavy chain 3, AAA+ lid domain; Dynein heavy... 0.01 OrthoFinder
OT_08G03900.1 No alias Galactose oxidase, central domain; Kelch repeat type 1... 0.01 OrthoFinder
OT_14G00090.1 No alias Dynein heavy chain, domain-1; Dynein heavy chain region... 0.01 OrthoFinder
Vocar.0018s0113.1 32898530 Dynein heavy chain, coiled coil stalk; Dynein heavy... 0.01 OrthoFinder
Vocar.0031s0108.1 32890040 Dynein heavy chain, coiled coil stalk; Dynein heavy... 0.02 OrthoFinder
XM_002500298.1 MICPUN_56610, 56610 Dynein heavy chain (DHC1.3) 0.02 OrthoFinder
XM_002504409.1 MICPUN_61052, 61052 Dynein gamma chain, flagellar outer arm 0.02 OrthoFinder
XM_002505534.1 MICPUN_104997, 104997 Dynein-1-beta heavy chain, flagellar inner arm I1 complex (DHC10) 0.03 OrthoFinder
XM_003059880.1 MicpuC2_70197, 70197 Flagellar outer dynein arm heavy chain gamma (ODA-DHCG) 0.01 OrthoFinder
XM_003063647.1 MicpuC2_45975, 45975 Inner dynein arm heavy chain 1-beta (IA1-DHC1B) 0.02 OrthoFinder
lcl|BLLF01000112.1_cds_GFH07737.1_2214 HaLaN_02580, GFH07737 Dynein heavy chain, ATP-binding dynein motor region... 0.01 OrthoFinder
lcl|BLLF01000314.1_cds_GFH10421.1_4898 HaLaN_05731, GFH10421 Dynein heavy chain, ATP-binding dynein motor region;... 0.02 OrthoFinder
lcl|BLLF01006307.1_cds_GFH32147.1_26624 HaLaN_31317, GFH32147 Dynein heavy chain AAA lid domain [Interproscan]. 0.01 OrthoFinder
lcl|LHPG02000004.1_cds_PRW59277.1_6968 PRW59277 Dynein heavy chain 0.03 OrthoFinder
lcl|LHPG02000026.1_cds_PRW18371.1_5850 PRW18371 Flagellar inner arm dynein 1 heavy chain beta 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP Enrichment
BP GO:0001510 RNA methylation IEP Enrichment
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Enrichment
BP GO:0006464 cellular protein modification process IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP Enrichment
MF GO:0008649 rRNA methyltransferase activity IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0015399 primary active transmembrane transporter activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
CC GO:0030117 membrane coat IEP Enrichment
CC GO:0030120 vesicle coat IEP Enrichment
CC GO:0030127 COPII vesicle coat IEP Enrichment
BP GO:0031167 rRNA methylation IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
BP GO:0036211 protein modification process IEP Enrichment
BP GO:0043412 macromolecule modification IEP Enrichment
BP GO:0048193 Golgi vesicle transport IEP Enrichment
BP GO:0070475 rRNA base methylation IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:0140102 catalytic activity, acting on a rRNA IEP Enrichment
InterPro domains Description Start Stop
IPR024743 Dynein_HC_stalk 150 268
IPR004273 Dynein_heavy_D6_P-loop 834 954
IPR024317 Dynein_heavy_chain_D4_dom 3 124
IPR041658 AAA_lid_11 955 1129
IPR035706 AAA_9 335 579
IPR041228 Dynein_C 1140 1439
No external refs found!