1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold1560.2

SymbC1.scaffold1560.2 (1560.2)


Aliases : 1560.2

Description : Oxoglutarate/iron-dependent dioxygenase; Phytanoyl-CoA dioxygenase [Interproscan].


Gene families : OG_01_0000184 (OrthoFinder) Phylogenetic Tree(s): OG0000184_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1560.2
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Dusal.0180s00009.1 33191161 Oxoglutarate/iron-dependent dioxygenase [Interproscan]. 0.01 OrthoFinder
XM_002502736.1 MICPUN_59138, 59138 Non-haem dioxygenase N-terminal domain;... 0.02 OrthoFinder
XM_003060845.1 MicpuC2_41218, 41218 Oxoglutarate/iron-dependent dioxygenase; Non-haem... 0.03 OrthoFinder
lcl|BLLF01001619.1_cds_GFH20353.1_14830 HaLaN_17461, GFH20353 Oxygenase-like protein 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0003735 structural constituent of ribosome IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
CC GO:0005840 ribosome IEP Enrichment
BP GO:0006412 translation IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
BP GO:0015931 nucleobase-containing compound transport IEP Enrichment
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
CC GO:0031090 organelle membrane IEP Enrichment
CC GO:0034464 BBSome IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
BP GO:1901264 carbohydrate derivative transport IEP Enrichment
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Enrichment
InterPro domains Description Start Stop
IPR008775 Phytyl_CoA_dOase 20 104
IPR005123 Oxoglu/Fe-dep_dioxygenase 342 440
No external refs found!