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  5. SymbC1.scaffold1522.2

SymbC1.scaffold1522.2 (1522.2)


Aliases : 1522.2

Description : Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan].


Gene families : OG_01_0000061 (OrthoFinder) Phylogenetic Tree(s): OG0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1522.2
Cluster HCCA: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020685.29 tig00020685_g12945.t1 No description available 0.01 OrthoFinder
Cre02.g146650 30785127 No description available 0.02 OrthoFinder
Cre17.g699500 30781967 No description available 0.02 OrthoFinder
Dusal.0218s00012.1 33202723 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
Dusal.0779s00005.1 33187351 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
EOD09199 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
EOD27859 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
OT_07G03340.1 No alias Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
Vocar.0001s0262.1 32886040 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
Vocar.0001s1535.1 32884574 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
Vocar.0014s0182.1 32888601 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.01 OrthoFinder
XM_002500211.1 MICPUN_79251, 79251 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
XM_002502164.1 MICPUN_82271, 82271 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.02 OrthoFinder
XM_002505321.1 MICPUN_86576, 86576 Tubulin-tyrosine ligase/Tubulin polyglutamylase [Interproscan]. 0.03 OrthoFinder

Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Enrichment
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP Enrichment
BP GO:0000375 RNA splicing, via transesterification reactions IEP Enrichment
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Enrichment
BP GO:0000398 mRNA splicing, via spliceosome IEP Enrichment
MF GO:0003924 GTPase activity IEP Enrichment
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Enrichment
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
MF GO:0005543 phospholipid binding IEP Enrichment
MF GO:0005544 calcium-dependent phospholipid binding IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006753 nucleoside phosphate metabolic process IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
MF GO:0008289 lipid binding IEP Enrichment
BP GO:0008380 RNA splicing IEP Enrichment
BP GO:0009117 nucleotide metabolic process IEP Enrichment
BP GO:0009165 nucleotide biosynthetic process IEP Enrichment
BP GO:0009187 cyclic nucleotide metabolic process IEP Enrichment
BP GO:0009190 cyclic nucleotide biosynthetic process IEP Enrichment
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017069 snRNA binding IEP Enrichment
MF GO:0017070 U6 snRNA binding IEP Enrichment
MF GO:0017076 purine nucleotide binding IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0019829 ATPase-coupled cation transmembrane transporter activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0030623 U5 snRNA binding IEP Enrichment
MF GO:0032553 ribonucleotide binding IEP Enrichment
MF GO:0032555 purine ribonucleotide binding IEP Enrichment
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP Enrichment
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Enrichment
MF GO:0036094 small molecule binding IEP Enrichment
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP Enrichment
MF GO:0043167 ion binding IEP Enrichment
MF GO:0043168 anion binding IEP Enrichment
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Enrichment
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Enrichment
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Enrichment
BP GO:0090407 organophosphate biosynthetic process IEP Enrichment
MF GO:0097159 organic cyclic compound binding IEP Enrichment
MF GO:0097367 carbohydrate derivative binding IEP Enrichment
MF GO:1901265 nucleoside phosphate binding IEP Enrichment
BP GO:1901293 nucleoside phosphate biosynthetic process IEP Enrichment
MF GO:1901363 heterocyclic compound binding IEP Enrichment
InterPro domains Description Start Stop
IPR004344 TTL/TTLL_fam 202 486
No external refs found!