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  5. Cpa|evm.model.tig00020510.54

Cpa|evm.model.tig00020510.54 (tig00020510_g9835.t1)


Aliases : tig00020510_g9835.t1

Description : Protein biosynthesis.aminoacyl-tRNA synthetase activities.lysine-tRNA ligase


Gene families : OG_01_0001772 (OrthoFinder) Phylogenetic Tree(s): OG0001772_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020510.54
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Cre03.g160500 30788286 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.02 OrthoFinder
Cz01g23090.t1 No alias Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan]. 0.02 OrthoFinder
Cz01g23100.t1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
Dusal.0028s00014.1 33198458 Aminoacyl-tRNA synthetase, class II (D/K/N) [Interproscan]. 0.03 OrthoFinder
PTI_22G00380.1 No alias OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
Transcript_contig_54752 54752 OB-fold nucleic acid binding domain, AA-tRNA... 0.03 OrthoFinder
XM_003063769.1 MicpuC2_53494, 53494 OB-fold nucleic acid binding domain, AA-tRNA... 0.02 OrthoFinder
lcl|BLLF01000394.1_cds_GFH11345.1_5822 HaLaN_06828, GFH11345 Lysyl-tRNA synthetase 0.02 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Enrichment
MF GO:0003723 RNA binding IEP Enrichment
MF GO:0003743 translation initiation factor activity IEP Enrichment
MF GO:0003746 translation elongation factor activity IEP Enrichment
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Enrichment
MF GO:0004455 ketol-acid reductoisomerase activity IEP Enrichment
MF GO:0004827 proline-tRNA ligase activity IEP Enrichment
CC GO:0005737 cytoplasm IEP Enrichment
BP GO:0006082 organic acid metabolic process IEP Enrichment
BP GO:0006139 nucleobase-containing compound metabolic process IEP Enrichment
BP GO:0006399 tRNA metabolic process IEP Enrichment
BP GO:0006414 translational elongation IEP Enrichment
BP GO:0006418 tRNA aminoacylation for protein translation IEP Enrichment
BP GO:0006433 prolyl-tRNA aminoacylation IEP Enrichment
BP GO:0006508 proteolysis IEP Enrichment
BP GO:0006520 cellular amino acid metabolic process IEP Enrichment
BP GO:0006807 nitrogen compound metabolic process IEP Enrichment
MF GO:0008135 translation factor activity, RNA binding IEP Enrichment
BP GO:0008150 biological_process IEP Enrichment
BP GO:0008152 metabolic process IEP Enrichment
BP GO:0009058 biosynthetic process IEP Enrichment
BP GO:0009081 branched-chain amino acid metabolic process IEP Enrichment
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Enrichment
BP GO:0016053 organic acid biosynthetic process IEP Enrichment
BP GO:0016070 RNA metabolic process IEP Enrichment
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Enrichment
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Enrichment
BP GO:0019752 carboxylic acid metabolic process IEP Enrichment
MF GO:0019842 vitamin binding IEP Enrichment
MF GO:0030170 pyridoxal phosphate binding IEP Enrichment
BP GO:0034660 ncRNA metabolic process IEP Enrichment
BP GO:0043038 amino acid activation IEP Enrichment
BP GO:0043039 tRNA aminoacylation IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0043436 oxoacid metabolic process IEP Enrichment
BP GO:0044237 cellular metabolic process IEP Enrichment
BP GO:0044238 primary metabolic process IEP Enrichment
BP GO:0044249 cellular biosynthetic process IEP Enrichment
BP GO:0044281 small molecule metabolic process IEP Enrichment
MF GO:0045182 translation regulator activity IEP Enrichment
MF GO:0070279 vitamin B6 binding IEP Enrichment
BP GO:0071704 organic substance metabolic process IEP Enrichment
MF GO:0090079 translation regulator activity, nucleic acid binding IEP Enrichment
BP GO:1901564 organonitrogen compound metabolic process IEP Enrichment
BP GO:1901576 organic substance biosynthetic process IEP Enrichment
InterPro domains Description Start Stop
IPR004364 Aa-tRNA-synt_II 4 283
No external refs found!