SymbC1.scaffold15.8 (15.8)

Aliases : 15.8

Description : Clp, N-terminal; Clp ATPase, C-terminal; ATPase, AAA-type, core; ClpA/ClpB, AAA lid domain; Protein of unknown function DUF3445 [Interproscan].

Gene families : OG_01_0000068 (OrthoFinder) Phylogenetic Tree(s): OG0000068_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold15.8
Cluster	HCCA: Cluster_32

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0019867	outer membrane	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR004176	Clp_R_dom	2294	2315
IPR004176	Clp_R_dom	2222	2266
IPR041546	ClpA/ClpB_AAA_lid	2532	2634
IPR021848	DUF3445	1960	2173
IPR019489	Clp_ATPase_C	2935	3014
IPR003959	ATPase_AAA_core	2393	2524
IPR003959	ATPase_AAA_core	2786	2929

External Links

No external refs found!

SymbC1.scaffold15.8 (15.8)

Expression Profile

Co-expression Networks

Functional Annotation