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  5. Cpa|evm.model.tig00020510.41

Cpa|evm.model.tig00020510.41 (tig00020510_g9823.t1)


Aliases : tig00020510_g9823.t1

Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component


Gene families : OG_01_0000736 (OrthoFinder) Phylogenetic Tree(s): OG0000736_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Cpa|evm.model.tig00020510.41
Cluster HCCA: Cluster_75

Target Alias Description ECC score Gene Family Method Actions
Cre04.g213450 30791227, VPS2A Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 OrthoFinder
Cre17.g735400 30782779, VPS2B Vesicle trafficking.endomembrane trafficking.ESCRT... 0.07 OrthoFinder
OT_12G01970.1 No alias Snf7 family [Interproscan]. 0.03 OrthoFinder
PTI_19G00980.1 No alias Snf7 family [Interproscan]. 0.04 OrthoFinder
PTI_21G00840.1 No alias Snf7 family [Interproscan]. 0.04 OrthoFinder
Sro1334_g263820.1 Contig785.g8786 Charged multivesicular body protein 0.02 OrthoFinder
Sro900_g217890.1 Contig2813.g22567 Body protein 2a 0.03 OrthoFinder
SymbC1.scaffold3111.1 3111.1 Snf7 family [Interproscan]. 0.02 OrthoFinder
Transcript_contig_59620 59620 Snf7 family [Interproscan]. 0.01 OrthoFinder
Transcript_contig_67861 67861 Snf7 family [Interproscan]. 0.01 OrthoFinder
XM_002505408.1 MICPUN_95710, 95710 Snf7 family [Interproscan]. 0.03 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8498509.1_7462 KAA8498509 Charged multivesicular body protein 2b 0.02 OrthoFinder
lcl|VRMN01000002.1_cds_KAA8497264.1_993 KAA8497264 Charged multivesicular body protein 2a-like 2 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Enrichment
MF GO:0003909 DNA ligase activity IEP Enrichment
MF GO:0003910 DNA ligase (ATP) activity IEP Enrichment
MF GO:0004672 protein kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005319 lipid transporter activity IEP Enrichment
MF GO:0005548 phospholipid transporter activity IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
BP GO:0016197 endosomal transport IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Enrichment
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Enrichment
BP GO:0019538 protein metabolic process IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Enrichment
CC GO:0036452 ESCRT complex IEP Enrichment
BP GO:0043170 macromolecule metabolic process IEP Enrichment
BP GO:0044260 cellular macromolecule metabolic process IEP Enrichment
BP GO:0071985 multivesicular body sorting pathway IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
MF GO:0140096 catalytic activity, acting on a protein IEP Enrichment
InterPro domains Description Start Stop
IPR005024 Snf7_fam 22 191
No external refs found!