Aliases : tig00020510_g9823.t1
Description : Vesicle trafficking.endomembrane trafficking.ESCRT (Endosomal Sorting Complex Required for Transport) complexes.ESCRT-III complex.VPS2/CHMP2 component
Gene families : OG_01_0000736 (OrthoFinder) Phylogenetic Tree(s): OG0000736_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Cpa|evm.model.tig00020510.41 | |
Cluster | HCCA: Cluster_75 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre04.g213450 | 30791227, VPS2A | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.05 | OrthoFinder | |
Cre17.g735400 | 30782779, VPS2B | Vesicle trafficking.endomembrane trafficking.ESCRT... | 0.07 | OrthoFinder | |
OT_12G01970.1 | No alias | Snf7 family [Interproscan]. | 0.03 | OrthoFinder | |
PTI_19G00980.1 | No alias | Snf7 family [Interproscan]. | 0.04 | OrthoFinder | |
PTI_21G00840.1 | No alias | Snf7 family [Interproscan]. | 0.04 | OrthoFinder | |
Sro1334_g263820.1 | Contig785.g8786 | Charged multivesicular body protein | 0.02 | OrthoFinder | |
Sro900_g217890.1 | Contig2813.g22567 | Body protein 2a | 0.03 | OrthoFinder | |
SymbC1.scaffold3111.1 | 3111.1 | Snf7 family [Interproscan]. | 0.02 | OrthoFinder | |
Transcript_contig_59620 | 59620 | Snf7 family [Interproscan]. | 0.01 | OrthoFinder | |
Transcript_contig_67861 | 67861 | Snf7 family [Interproscan]. | 0.01 | OrthoFinder | |
XM_002505408.1 | MICPUN_95710, 95710 | Snf7 family [Interproscan]. | 0.03 | OrthoFinder | |
lcl|VRMN01000001.1_cds_KAA8498509.1_7462 | KAA8498509 | Charged multivesicular body protein 2b | 0.02 | OrthoFinder | |
lcl|VRMN01000002.1_cds_KAA8497264.1_993 | KAA8497264 | Charged multivesicular body protein 2a-like 2 | 0.03 | OrthoFinder |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000813 | ESCRT I complex | IEP | Enrichment |
MF | GO:0003909 | DNA ligase activity | IEP | Enrichment |
MF | GO:0003910 | DNA ligase (ATP) activity | IEP | Enrichment |
MF | GO:0004672 | protein kinase activity | IEP | Enrichment |
MF | GO:0004843 | thiol-dependent deubiquitinase | IEP | Enrichment |
MF | GO:0005319 | lipid transporter activity | IEP | Enrichment |
MF | GO:0005548 | phospholipid transporter activity | IEP | Enrichment |
MF | GO:0008234 | cysteine-type peptidase activity | IEP | Enrichment |
MF | GO:0008242 | omega peptidase activity | IEP | Enrichment |
BP | GO:0016197 | endosomal transport | IEP | Enrichment |
MF | GO:0016301 | kinase activity | IEP | Enrichment |
MF | GO:0016772 | transferase activity, transferring phosphorus-containing groups | IEP | Enrichment |
MF | GO:0016773 | phosphotransferase activity, alcohol group as acceptor | IEP | Enrichment |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Enrichment |
BP | GO:0019538 | protein metabolic process | IEP | Enrichment |
MF | GO:0019783 | ubiquitin-like protein-specific protease activity | IEP | Enrichment |
BP | GO:0032509 | endosome transport via multivesicular body sorting pathway | IEP | Enrichment |
CC | GO:0036452 | ESCRT complex | IEP | Enrichment |
BP | GO:0043170 | macromolecule metabolic process | IEP | Enrichment |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Enrichment |
BP | GO:0071985 | multivesicular body sorting pathway | IEP | Enrichment |
MF | GO:0101005 | deubiquitinase activity | IEP | Enrichment |
MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Enrichment |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005024 | Snf7_fam | 22 | 191 |
No external refs found! |