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  5. SymbC1.scaffold1467.2

SymbC1.scaffold1467.2 (1467.2)


Aliases : 1467.2

Description : Cyclic nucleotide-binding domain [Interproscan].


Gene families : OG_01_0000079 (OrthoFinder) Phylogenetic Tree(s): OG0000079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1467.2
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020960.51 tig00020960_g16577.t1 No description available 0.01 OrthoFinder
Cpa|evm.model.tig00021244.33 tig00021244_g19588.t1 Putative cyclic nucleotide-gated ion channel 9... 0.01 OrthoFinder
EOD10747 No alias Cyclic nucleotide binding K+ channel [Ensembl]. 0.01 OrthoFinder
SymbC1.scaffold1142.2 1142.2 Ion transport domain [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold3638.5 3638.5 Potassium channel domain; Cyclic nucleotide-binding... 0.03 OrthoFinder
SymbC1.scaffold4455.2 4455.2 Ion transport domain [Interproscan]. 0.05 OrthoFinder
XM_002506035.1 MICPUN_103982, 103982 Voltage-gated ion channel superfamily 0.01 OrthoFinder
lcl|BLLF01000227.1_cds_GFH09351.1_3828 HaLaN_04470, GFH09351 Cyclic nucleotide-binding domain-containing protein 0.01 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Enrichment
MF GO:0003777 microtubule motor activity IEP Enrichment
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Enrichment
MF GO:0005216 ion channel activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006811 ion transport IEP Enrichment
BP GO:0006928 movement of cell or subcellular component IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008017 microtubule binding IEP Enrichment
MF GO:0008092 cytoskeletal protein binding IEP Enrichment
MF GO:0008252 nucleotidase activity IEP Enrichment
MF GO:0008253 5'-nucleotidase activity IEP Enrichment
BP GO:0009166 nucleotide catabolic process IEP Enrichment
BP GO:0009262 deoxyribonucleotide metabolic process IEP Enrichment
BP GO:0009264 deoxyribonucleotide catabolic process IEP Enrichment
MF GO:0015075 ion transmembrane transporter activity IEP Enrichment
MF GO:0015267 channel activity IEP Enrichment
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Enrichment
MF GO:0015631 tubulin binding IEP Enrichment
MF GO:0016462 pyrophosphatase activity IEP Enrichment
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Enrichment
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Enrichment
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Enrichment
MF GO:0017111 nucleoside-triphosphatase activity IEP Enrichment
MF GO:0022803 passive transmembrane transporter activity IEP Enrichment
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Enrichment
BP GO:1901292 nucleoside phosphate catabolic process IEP Enrichment
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 41 128
No external refs found!