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  5. SymbC1.scaffold14594.1

SymbC1.scaffold14594.1 (14594.1)


Aliases : 14594.1

Description : Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan].


Gene families : OG_01_0001820 (OrthoFinder) Phylogenetic Tree(s): OG0001820_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold14594.1
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000128.22 tig00000128_g7223.t1 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cre12.g529651 30793228 Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder
Cz05g29300.t1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.03 OrthoFinder
PTI_21G01720.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.02 OrthoFinder
Sro1315_g262090.1 Contig2837.g22773 60S ribosomal protein L7a 0.02 OrthoFinder
TP18G02460.1 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.01 OrthoFinder
Transcript_contig_80317 80317 Hypothetical protein 0.01 OrthoFinder
XM_002499781.1 MICPUN_107645, 107645 Ribosomal protein L7Ae/L30e/S12e/Gadd45 [Interproscan]. 0.02 OrthoFinder
lcl|VRMN01000001.1_cds_KAA8497910.1_6863 KAA8497910 60S ribosomal protein L7a-2 0.02 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004797 thymidine kinase activity IEP Enrichment
BP GO:0006650 glycerophospholipid metabolic process IEP Enrichment
BP GO:0008612 peptidyl-lysine modification to peptidyl-hypusine IEP Enrichment
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Enrichment
BP GO:0018205 peptidyl-lysine modification IEP Enrichment
MF GO:0019136 deoxynucleoside kinase activity IEP Enrichment
MF GO:0019205 nucleobase-containing compound kinase activity IEP Enrichment
MF GO:0019206 nucleoside kinase activity IEP Enrichment
BP GO:0046486 glycerolipid metabolic process IEP Enrichment
BP GO:0046488 phosphatidylinositol metabolic process IEP Enrichment
BP GO:0051604 protein maturation IEP Enrichment
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 94 180
No external refs found!