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  5. SymbC1.scaffold14578.1

SymbC1.scaffold14578.1 (14578.1)


Aliases : 14578.1

Description : Domain of unknown function DUF1549; Domain of unknown function DUF1553; Bacterial Ig-like, group 2 [Interproscan].


Gene families : OG_01_0001322 (OrthoFinder) Phylogenetic Tree(s): OG0001322_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold14578.1
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold1.1031 1.1031 Domain of unknown function DUF1549; Domain of unknown... 0.03 OrthoFinder
SymbC1.scaffold1.1462 1.1462 Domain of unknown function DUF1549; Domain of unknown... 0.05 OrthoFinder
SymbC1.scaffold2.651 2.651 Domain of unknown function DUF1553; Solute carrier... 0.03 OrthoFinder
SymbC1.scaffold27051.1 27051.1 Domain of unknown function DUF1549 [Interproscan]. 0.06 OrthoFinder
SymbC1.scaffold36907.1 36907.1 Domain of unknown function DUF1549 [Interproscan]. 0.04 OrthoFinder
SymbC1.scaffold39125.1 39125.1 Domain of unknown function DUF1553 [Interproscan]. 0.03 OrthoFinder
SymbC1.scaffold9.690 9.690 Protein of unknown function DUF1501; Domain of unknown... 0.03 OrthoFinder

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003725 double-stranded RNA binding IEP Enrichment
BP GO:0006040 amino sugar metabolic process IEP Enrichment
BP GO:0006541 glutamine metabolic process IEP Enrichment
BP GO:0006542 glutamine biosynthetic process IEP Enrichment
BP GO:0006629 lipid metabolic process IEP Enrichment
BP GO:0006633 fatty acid biosynthetic process IEP Enrichment
BP GO:0008610 lipid biosynthetic process IEP Enrichment
BP GO:0008653 lipopolysaccharide metabolic process IEP Enrichment
BP GO:0009103 lipopolysaccharide biosynthetic process IEP Enrichment
BP GO:0009254 peptidoglycan turnover IEP Enrichment
MF GO:0015002 obsolete heme-copper terminal oxidase activity IEP Enrichment
BP GO:0044255 cellular lipid metabolic process IEP Enrichment
CC GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) IEP Enrichment
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Enrichment
MF GO:0070402 NADPH binding IEP Enrichment
InterPro domains Description Start Stop
IPR003343 Big_2 58 106
IPR003343 Big_2 223 258
IPR011444 DUF1549 291 473
IPR022655 DUF1553 525 602
No external refs found!