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  5. SymbC1.scaffold1440.1

SymbC1.scaffold1440.1 (1440.1)


Aliases : 1440.1

Description : Dynein heavy chain region D6 P-loop domain; Dynein heavy chain AAA lid domain; Dynein heavy chain, C-terminal domain [Interproscan].


Gene families : OG_01_0000011 (OrthoFinder) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: SymbC1.scaffold1440.1
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
SymbC1.scaffold4420.2 4420.2 Dynein heavy chain region D6 P-loop domain; Dynein heavy... 0.03 OrthoFinder
Transcript_contig_53917 53917 Dynein heavy chain, AAA 5 extension domain; Dynein heavy... 0.01 OrthoFinder
Transcript_contig_54511 54511 Dynein heavy chain, AAA module D4; Dynein heavy chain,... 0.01 OrthoFinder
Transcript_contig_60015 60015 Dynein heavy chain, C-terminal domain [Interproscan]. 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEA Interproscan
BP GO:0007018 microtubule-based movement IEA Interproscan
CC GO:0030286 dynein complex IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Enrichment
MF GO:0004417 hydroxyethylthiazole kinase activity IEP Enrichment
MF GO:0004843 thiol-dependent deubiquitinase IEP Enrichment
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0006270 DNA replication initiation IEP Enrichment
BP GO:0006397 mRNA processing IEP Enrichment
BP GO:0006766 vitamin metabolic process IEP Enrichment
BP GO:0006767 water-soluble vitamin metabolic process IEP Enrichment
BP GO:0006772 thiamine metabolic process IEP Enrichment
MF GO:0008234 cysteine-type peptidase activity IEP Enrichment
MF GO:0008239 dipeptidyl-peptidase activity IEP Enrichment
MF GO:0008242 omega peptidase activity IEP Enrichment
MF GO:0008703 5-amino-6-(5-phosphoribosylamino)uracil reductase activity IEP Enrichment
BP GO:0009110 vitamin biosynthetic process IEP Enrichment
BP GO:0009228 thiamine biosynthetic process IEP Enrichment
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Enrichment
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Enrichment
MF GO:0016160 amylase activity IEP Enrichment
MF GO:0016161 beta-amylase activity IEP Enrichment
MF GO:0016491 oxidoreductase activity IEP Enrichment
BP GO:0016579 protein deubiquitination IEP Enrichment
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Enrichment
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Enrichment
BP GO:0042723 thiamine-containing compound metabolic process IEP Enrichment
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Enrichment
MF GO:0050660 flavin adenine dinucleotide binding IEP Enrichment
BP GO:0070646 protein modification by small protein removal IEP Enrichment
BP GO:0070647 protein modification by small protein conjugation or removal IEP Enrichment
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Enrichment
CC GO:0098588 bounding membrane of organelle IEP Enrichment
MF GO:0101005 deubiquitinase activity IEP Enrichment
InterPro domains Description Start Stop
IPR041658 AAA_lid_11 359 457
IPR041228 Dynein_C 458 630
IPR004273 Dynein_heavy_D6_P-loop 187 316
No external refs found!