1. Home
  2. Species
  3. Cladocopium sp. clade C
  4. Sequence
  5. SymbC1.scaffold1391.10

SymbC1.scaffold1391.10 (1391.10)


Aliases : 1391.10

Description : DEAD/DEAH box helicase domain; Domain of unknown function DUF4217; Helicase, C-terminal [Interproscan].


Gene families : OG_01_0000319 (OrthoFinder) Phylogenetic Tree(s): OG0000319_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: SymbC1.scaffold1391.10

Target Alias Description ECC score Gene Family Method Actions
lcl|BLLF01002892.1_cds_GFH25696.1_20173 HaLaN_23701, GFH25696 RNA helicase 0.02 OrthoFinder
lcl|BLLF01003854.1_cds_GFH28385.1_22862 HaLaN_26865, GFH28385 RNA helicase 0.01 OrthoFinder

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0001534 radial spoke IEP Enrichment
BP GO:0003341 cilium movement IEP Enrichment
MF GO:0004618 phosphoglycerate kinase activity IEP Enrichment
MF GO:0005509 calcium ion binding IEP Enrichment
BP GO:0006090 pyruvate metabolic process IEP Enrichment
BP GO:0006096 glycolytic process IEP Enrichment
BP GO:0006165 nucleoside diphosphate phosphorylation IEP Enrichment
BP GO:0006468 protein phosphorylation IEP Enrichment
BP GO:0006757 ATP generation from ADP IEP Enrichment
BP GO:0006793 phosphorus metabolic process IEP Enrichment
BP GO:0006796 phosphate-containing compound metabolic process IEP Enrichment
BP GO:0007017 microtubule-based process IEP Enrichment
BP GO:0007018 microtubule-based movement IEP Enrichment
MF GO:0008483 transaminase activity IEP Enrichment
BP GO:0009132 nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP Enrichment
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP Enrichment
MF GO:0010181 FMN binding IEP Enrichment
MF GO:0016301 kinase activity IEP Enrichment
BP GO:0016310 phosphorylation IEP Enrichment
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Enrichment
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Enrichment
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP Enrichment
BP GO:0030030 cell projection organization IEP Enrichment
BP GO:0030031 cell projection assembly IEP Enrichment
MF GO:0043169 cation binding IEP Enrichment
BP GO:0044782 cilium organization IEP Enrichment
BP GO:0046031 ADP metabolic process IEP Enrichment
MF GO:0046872 metal ion binding IEP Enrichment
BP GO:0046939 nucleotide phosphorylation IEP Enrichment
BP GO:0060271 cilium assembly IEP Enrichment
BP GO:0060294 cilium movement involved in cell motility IEP Enrichment
BP GO:0070925 organelle assembly IEP Enrichment
BP GO:0120031 plasma membrane bounded cell projection assembly IEP Enrichment
BP GO:0120036 plasma membrane bounded cell projection organization IEP Enrichment
InterPro domains Description Start Stop
IPR025313 DUF4217 2655 2715
IPR011545 DEAD/DEAH_box_helicase_dom 198 343
IPR001650 Helicase_C 385 488
No external refs found!