SymbC1.scaffold1382.9 (1382.9)

Aliases : 1382.9

Description : EF-hand domain [Interproscan].

Gene families : OG_01_0000037 (OrthoFinder) Phylogenetic Tree(s): OG0000037_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: SymbC1.scaffold1382.9
Cluster	HCCA: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
Cre03.g150300	30787530	Calmodulin-3 OS=Oryza sativa subsp. japonica	0.01	OrthoFinder
Cre03.g178150	30788235, CAM1	Calmodulin OS=Chlamydomonas reinhardtii	0.02	OrthoFinder
EOD20718	No alias	EF-hand domain pair [Interproscan].	0.02	OrthoFinder
Sro321_g116830.1	Contig56.g439	Putative calmodulin-like protein	0.02	OrthoFinder
SymbC1.scaffold958.2	958.2	EF-hand domain [Interproscan].	0.03	OrthoFinder
Vocar.0002s0032.1	32890592	Hypothetical protein	0.02	OrthoFinder

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Enrichment
CC	GO:0009521	photosystem	IEP	Enrichment
CC	GO:0009522	photosystem I	IEP	Enrichment
CC	GO:0009538	photosystem I reaction center	IEP	Enrichment
BP	GO:0015979	photosynthesis	IEP	Enrichment
BP	GO:0018208	peptidyl-proline modification	IEP	Enrichment

InterPro domains	Description	Start	Stop
IPR002048	EF_hand_dom	81	140

External Links

No external refs found!